Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 RPL31P53-201ENST00000457065 348 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 RPS27AP9-201ENST00000477681 438 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM4Q9C037 RPL7P38-201ENST00000488396 739 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 AC092868.3-201ENST00000560515 784 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 SNORD39.4-201ENST00000620099 78 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 AL356321.1-201ENST00000621360 228 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 AL136360.1-201ENST00000503377 1900 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM4Q9C037 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC069540.1-201ENST00000446320 988 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC110794.1-201ENST00000505816 425 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 KLHL2P1-201ENST00000508691 521 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 FCF1P8-201ENST00000510322 597 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC023043.3-201ENST00000593113 385 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC069304.3-201ENST00000603938 1084 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC093732.2-201ENST00000607950 274 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AL591516.1-201ENST00000611326 274 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 AL359535.1-201ENST00000612100 1087 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 AL354950.1-201ENST00000614150 568 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC015726.3-201ENST00000624501 418 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM4Q9C037 AC104446.1-201ENST00000613728 1321 ntBASIC3.1□□□□□ -1.91
TRIM4Q9C037 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM4Q9C037 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TRIM4Q9C037 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 RNU6-244P-201ENST00000391028 104 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AL096701.2-201ENST00000416920 238 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 SSXP9-201ENST00000417503 292 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AC012065.2-201ENST00000421295 375 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AL031736.2-201ENST00000426573 787 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 Z93242.1-201ENST00000427102 353 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 GSTA11P-201ENST00000452866 669 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AC008571.1-201ENST00000467232 300 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 HMGN2P13-201ENST00000476476 274 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 RN7SL432P-201ENST00000484057 298 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 YWHAEP4-201ENST00000505390 198 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 RNA5SP356-201ENST00000515972 94 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 MIR3690-201ENST00000580266 75 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 MIR4435-1-201ENST00000582552 80 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 FAM60CP-201ENST00000591086 664 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AC006539.2-201ENST00000601729 572 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AL109653.1-201ENST00000603091 248 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 RPL23AP88-201ENST00000605759 454 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 AC113194.1-201ENST00000606037 500 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TRIM4Q9C037 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM4Q9C037 MTND5P24-201ENST00000438892 1767 ntBASIC3.09□□□□□ -1.91
TRIM4Q9C037 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM4Q9C037 AC006378.2-201ENST00000623178 2476 ntBASIC3.09□□□□□ -1.92
TRIM4Q9C037 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.09□□□□□ -1.92
TRIM4Q9C037 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM4Q9C037 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM4Q9C037 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 SNORA54-201ENST00000384281 123 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 RNA5SP492-201ENST00000411330 114 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 RPL19P1-201ENST00000411635 428 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 RFESDP1-201ENST00000422350 461 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM4Q9C037 AL513175.1-201ENST00000431492 780 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms