Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AL159987.1-201ENST00000347911 293 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 RPL21P38-201ENST00000418090 167 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC016027.5-201ENST00000427227 210 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AL136097.1-201ENST00000456945 913 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC021205.1-201ENST00000468797 348 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 FTH1P8-201ENST00000498161 514 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC105384.2-201ENST00000508433 640 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 RNU7-200P-201ENST00000516105 62 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 RN7SKP283-201ENST00000517197 270 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 SNORD39.3-201ENST00000584451 71 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC025857.2-201ENST00000602711 238 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC145423.1-201ENST00000605712 336 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 BX284668.6-201ENST00000606899 438 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AL137067.2-201ENST00000621202 131 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AL132640.3-201ENST00000630473 177 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC104162.1-201ENST00000430831 2382 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC007996.1-201ENST00000620414 2821 ntBASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 Y_RNA.105-201ENST00000363182 111 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 Y_RNA.237-201ENST00000364439 102 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 RNU4-42P-201ENST00000364738 142 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 SNORD115-7-201ENST00000365306 82 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 RNU1-64P-201ENST00000365443 163 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 RNU6-306P-201ENST00000384617 107 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 CYCSP10-201ENST00000417973 294 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 RPS4XP5-201ENST00000419038 768 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AL139095.3-201ENST00000419672 1203 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC234779.1-201ENST00000425910 285 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 NOTCH2P1-201ENST00000443481 624 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 Z95327.1-201ENST00000446082 482 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AL359073.1-201ENST00000448036 403 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 RPS15AP1-201ENST00000457423 391 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 SSX8-201ENST00000506270 579 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC074198.2-201ENST00000508153 258 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC096754.1-201ENST00000508904 818 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 RPS27AP18-201ENST00000515536 459 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC022884.2-201ENST00000578535 580 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 MIR5692C1-201ENST00000585309 91 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC139493.1-201ENST00000604368 397 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 HMGN2P28-201ENST00000606102 262 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC064801.1-201ENST00000612025 407 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AL365265.1-201ENST00000621045 234 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC062022.1-201ENST00000451026 1684 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 GUCY1B2-204ENST00000531898 1979 ntBASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL25A1Q9BXS0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms