Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL451050.1-201ENST00000450126 415 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS1Q99742 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.09□□□□□ -1.75
NPAS1Q99742 AC053481.1-201ENST00000467217 306 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 ST13P14-201ENST00000474095 734 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 RN7SL41P-201ENST00000476144 297 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.09□□□□□ -1.75
NPAS1Q99742 AC079140.3-201ENST00000511111 550 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.09□□□□□ -1.75
NPAS1Q99742 FABP5P5-201ENST00000515537 406 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.09□□□□□ -1.75
NPAS1Q99742 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.09□□□□□ -1.75
NPAS1Q99742 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS1Q99742 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS1Q99742 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.09□□□□□ -1.75
NPAS1Q99742 AC069061.3-201ENST00000582254 823 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AC005771.1-201ENST00000585581 349 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 SLC25A36P1-201ENST00000590111 465 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 HMGB2P1-201ENST00000591146 634 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AL451086.1-201ENST00000605596 223 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AC008250.2-201ENST00000615261 205 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AC099842.1-201ENST00000619919 596 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AL139089.1-201ENST00000620372 975 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS1Q99742 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.09□□□□□ -1.75
NPAS1Q99742 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS1Q99742 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.09□□□□□ -1.75
NPAS1Q99742 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
NPAS1Q99742 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.09□□□□□ -1.76
NPAS1Q99742 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NPAS1Q99742 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NPAS1Q99742 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
NPAS1Q99742 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS1Q99742 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
NPAS1Q99742 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NPAS1Q99742 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS1Q99742 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NPAS1Q99742 RN7SKP115-201ENST00000363177 317 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NPAS1Q99742 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS1Q99742 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS1Q99742 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NPAS1Q99742 RNU6-821P-201ENST00000390995 107 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 DEFB108C-201ENST00000400154 252 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC007899.1-201ENST00000412776 775 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 CDK8P2-201ENST00000415020 547 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 USP9YP13-201ENST00000417797 480 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AL513174.1-201ENST00000423182 629 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AL445669.1-201ENST00000426743 755 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.08□□□□□ -1.76
NPAS1Q99742 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC109583.1-201ENST00000432156 268 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 ELOCP18-201ENST00000434209 337 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 SAGE4P-201ENST00000442271 3381 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 Z82190.1-201ENST00000454534 490 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AC146507.1-201ENST00000468335 354 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
NPAS1Q99742 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.08□□□□□ -1.76
NPAS1Q99742 RPS23P1-201ENST00000491662 432 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AC112204.1-201ENST00000502591 103 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AC025445.1-201ENST00000502728 300 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AK3P4-201ENST00000504283 583 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS1Q99742 ARL2BPP4-201ENST00000506854 471 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.08□□□□□ -1.76
NPAS1Q99742 MTCO1P24-201ENST00000515438 1558 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 RNU6-714P-201ENST00000516963 103 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AP003392.2-201ENST00000527269 208 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC092125.1-201ENST00000562568 1995 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 MIR5697-201ENST00000578045 78 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS1Q99742 MIR4715-201ENST00000584117 79 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.08□□□□□ -1.76
NPAS1Q99742 AL353997.4-201ENST00000586196 166 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AL669831.4-202ENST00000590817 238 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AC079089.3-201ENST00000603094 673 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AC007390.2-201ENST00000606229 3803 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 MIR6891-201ENST00000618788 93 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 AL590240.3-201ENST00000621416 943 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.08□□□□□ -1.76
NPAS1Q99742 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS1Q99742 AC016588.2-201ENST00000632484 3021 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms