Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
IFT140Q96RY7 CDC27P2-201ENST00000425026 1922 ntBASIC4.09□□□□□ -1.76
IFT140Q96RY7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
IFT140Q96RY7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
IFT140Q96RY7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IFT140Q96RY7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.08□□□□□ -1.76
IFT140Q96RY7 HMGB3P23-201ENST00000414981 585 ntBASIC4.08□□□□□ -1.76
IFT140Q96RY7 MORF4L1P6-201ENST00000418771 268 ntBASIC4.08□□□□□ -1.76
IFT140Q96RY7 AL034379.1-201ENST00000423216 253 ntBASIC4.08□□□□□ -1.76
IFT140Q96RY7 RPL23AP11-201ENST00000475260 469 ntBASIC4.08□□□□□ -1.76
IFT140Q96RY7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.08□□□□□ -1.76
IFT140Q96RY7 MIR4498-201ENST00000577599 66 ntBASIC4.08□□□□□ -1.76
IFT140Q96RY7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.08□□□□□ -1.76
IFT140Q96RY7 AC046143.2-201ENST00000609789 160 ntBASIC4.08□□□□□ -1.76
IFT140Q96RY7 AC092628.2-201ENST00000622492 339 ntBASIC4.08□□□□□ -1.76
IFT140Q96RY7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
IFT140Q96RY7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
IFT140Q96RY7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.08□□□□□ -1.76
IFT140Q96RY7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IFT140Q96RY7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IFT140Q96RY7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.07□□□□□ -1.76
IFT140Q96RY7 AL512646.1-201ENST00000269395 1077 ntBASIC4.07□□□□□ -1.76
IFT140Q96RY7 RN7SL75P-201ENST00000461926 281 ntBASIC4.07□□□□□ -1.76
IFT140Q96RY7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.07□□□□□ -1.76
IFT140Q96RY7 AC116337.1-201ENST00000509680 687 ntBASIC4.07□□□□□ -1.76
IFT140Q96RY7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.07□□□□□ -1.76
IFT140Q96RY7 SNORA31.1-201ENST00000515993 133 ntBASIC4.07□□□□□ -1.76
IFT140Q96RY7 SNORA31.5-201ENST00000516190 133 ntBASIC4.07□□□□□ -1.76
IFT140Q96RY7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.07□□□□□ -1.76
IFT140Q96RY7 AL355836.1-201ENST00000555951 870 ntBASIC4.07□□□□□ -1.76
IFT140Q96RY7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.07□□□□□ -1.76
IFT140Q96RY7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
IFT140Q96RY7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
IFT140Q96RY7 AC093010.3-201ENST00000570269 15214 ntBASIC4.07□□□□□ -1.76
IFT140Q96RY7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
IFT140Q96RY7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
IFT140Q96RY7 AC013470.3-201ENST00000420252 1194 ntBASIC4.06□□□□□ -1.76
IFT140Q96RY7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.06□□□□□ -1.76
IFT140Q96RY7 EXTL2P1-201ENST00000446218 416 ntBASIC4.06□□□□□ -1.76
IFT140Q96RY7 HMGB3P8-201ENST00000449709 577 ntBASIC4.06□□□□□ -1.76
IFT140Q96RY7 NIPA2P2-201ENST00000496376 1083 ntBASIC4.06□□□□□ -1.76
IFT140Q96RY7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.06□□□□□ -1.76
IFT140Q96RY7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.06□□□□□ -1.76
IFT140Q96RY7 AC021269.2-201ENST00000532318 330 ntBASIC4.06□□□□□ -1.76
IFT140Q96RY7 AL109741.3-201ENST00000561748 592 ntBASIC4.06□□□□□ -1.76
IFT140Q96RY7 AC011492.1-201ENST00000600023 315 ntBASIC4.06□□□□□ -1.76
IFT140Q96RY7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
IFT140Q96RY7 GSTA9P-201ENST00000406231 611 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 USP9YP20-201ENST00000419224 558 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL159169.1-201ENST00000421119 127 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.05□□□□□ -1.76
IFT140Q96RY7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.05□□□□□ -1.76
IFT140Q96RY7 AP004217.1-201ENST00000480579 346 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 AC108860.1-201ENST00000484521 383 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 USP9YP5-201ENST00000511770 630 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 HSPE1P18-201ENST00000517602 280 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.05□□□□□ -1.76
IFT140Q96RY7 GMCL1P2-201ENST00000605230 823 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 CRYM-AS1-204ENST00000637983 556 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL450326.2-201ENST00000421913 1962 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 RNA5SP456-201ENST00000364002 114 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
IFT140Q96RY7 SNORA64-201ENST00000384674 134 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL512633.1-201ENST00000399931 655 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL583834.1-201ENST00000406943 343 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL121882.1-201ENST00000422893 417 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 HMGB1P48-201ENST00000446155 598 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL590399.6-201ENST00000446396 307 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 RPL23AP42-201ENST00000471152 471 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 OR5BN1P-201ENST00000532955 829 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.05□□□□□ -1.76
IFT140Q96RY7 AC103710.3-201ENST00000608157 948 ntBASIC4.05□□□□□ -1.76
IFT140Q96RY7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.05□□□□□ -1.76
IFT140Q96RY7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.04□□□□□ -1.76
IFT140Q96RY7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
IFT140Q96RY7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.04□□□□□ -1.76
IFT140Q96RY7 RPL23AP49-201ENST00000492925 468 ntBASIC4.04□□□□□ -1.76
IFT140Q96RY7 AC068305.1-201ENST00000497406 726 ntBASIC4.04□□□□□ -1.76
IFT140Q96RY7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
IFT140Q96RY7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.04□□□□□ -1.76
IFT140Q96RY7 RPS27AP18-201ENST00000515536 459 ntBASIC4.04□□□□□ -1.76
IFT140Q96RY7 AC245166.1-201ENST00000521012 253 ntBASIC4.04□□□□□ -1.76
IFT140Q96RY7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.04□□□□□ -1.76
IFT140Q96RY7 MTCYBP28-201ENST00000566728 1132 ntBASIC4.04□□□□□ -1.76
IFT140Q96RY7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.04□□□□□ -1.76
IFT140Q96RY7 MIR6715B-201ENST00000637172 77 ntBASIC4.04□□□□□ -1.76
IFT140Q96RY7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.04□□□□□ -1.76
IFT140Q96RY7 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
IFT140Q96RY7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
IFT140Q96RY7 SNORA70E-201ENST00000384492 135 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
IFT140Q96RY7 AL592045.1-201ENST00000429867 352 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 Z98742.2-201ENST00000431564 187 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 RNU7-170P-201ENST00000459303 61 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
IFT140Q96RY7 NPM1P35-201ENST00000533043 868 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms