Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC116347.2-201ENST00000514912 523 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 MTCYBP41-201ENST00000528913 1123 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 HIGD1AP5-201ENST00000529959 259 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC018630.1-201ENST00000541376 925 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC069240.1-201ENST00000548774 375 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 SETP2-201ENST00000553886 926 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC034268.2-201ENST00000571784 482 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 NBR2-204ENST00000587322 63 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC083760.1-201ENST00000589621 670 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC022916.3-201ENST00000592961 742 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC138Q96M89 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC091965.4-201ENST00000607691 587 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AL391497.1-201ENST00000608671 547 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AL161616.1-201ENST00000611867 286 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC002550.2-201ENST00000621246 394 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 AC138649.5-201ENST00000637456 137 ntBASIC4.46□□□□□ -1.7
CCDC138Q96M89 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC138Q96M89 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC138Q96M89 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCDC138Q96M89 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 MTND4P4-201ENST00000439033 1366 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 RNA5SP235-201ENST00000365411 114 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 RNA5SP167-201ENST00000365461 116 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 RNA5SP397-201ENST00000391323 118 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 RNA5SP239-201ENST00000410218 129 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 CYCSP46-201ENST00000423569 204 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 BX119904.4-201ENST00000424402 301 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 OR8F1P-201ENST00000425243 930 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 RPL21P91-201ENST00000429231 479 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC096638.2-201ENST00000434965 711 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 UBE2V1P13-201ENST00000436983 439 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 MTND4P32-201ENST00000437189 1237 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AL353748.1-201ENST00000440753 474 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC112653.1-201ENST00000443851 386 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 COX6CP2-201ENST00000444980 225 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 FTH1P2-201ENST00000466086 412 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 AP000797.1-201ENST00000478870 387 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC012158.1-204ENST00000483430 465 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC080014.1-201ENST00000496877 1201 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 MTND5P13-201ENST00000513046 1079 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC025881.1-201ENST00000518851 512 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 AP006289.1-201ENST00000538089 277 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC006270.2-201ENST00000578523 652 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 RN7SL690P-201ENST00000582087 240 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 SNORD84-203ENST00000584275 78 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 TPMTP1-201ENST00000592307 737 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 U73023.1-201ENST00000603134 700 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AL139395.1-201ENST00000603662 160 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC135507.1-201ENST00000607214 561 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AL158063.1-201ENST00000615349 536 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 AC004925.1-201ENST00000624256 2706 ntBASIC4.45□□□□□ -1.7
CCDC138Q96M89 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC138Q96M89 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC138Q96M89 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC021146.4-201ENST00000309229 279 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 RNA5SP513-201ENST00000364648 118 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 RHOT1P2-201ENST00000366423 333 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 RNU11-4P-201ENST00000391149 133 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 RPL17P12-201ENST00000413391 526 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 RPL26P29-201ENST00000415623 438 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 OR1AA1P-201ENST00000419597 916 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 Z97055.1-201ENST00000419730 712 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms