Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RPL31P50-201ENST00000471002 296 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC104763.1-201ENST00000475274 360 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC116347.2-201ENST00000514912 523 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 RNU6-405P-201ENST00000516637 110 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AP004247.1-201ENST00000531556 1289 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 MIR544B-201ENST00000582372 78 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC008966.2-201ENST00000606157 453 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC025588.4-201ENST00000615802 908 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC095050.2-201ENST00000510748 1458 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC106871.1-201ENST00000568324 3102 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS50Q96JG6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS50Q96JG6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS50Q96JG6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC130650.2-201ENST00000618736 2403 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 ELL2P4-201ENST00000446870 1376 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS50Q96JG6 RNA5SP332-201ENST00000391063 115 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 RNU2-66P-201ENST00000410650 161 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 TPMTP2-201ENST00000414372 726 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 OFD1P18Y-201ENST00000420889 959 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 UQCRBP1-201ENST00000421129 336 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AL592293.2-201ENST00000422292 996 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC104651.1-201ENST00000427559 735 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 RPL37P21-201ENST00000435890 276 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 RPL7P28-201ENST00000437739 740 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC092641.1-201ENST00000440229 772 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AL022238.1-201ENST00000442557 355 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 RPL36AP15-201ENST00000444514 266 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC239367.2-201ENST00000447309 705 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 BX322784.1-201ENST00000455793 1077 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 TRBV26-201ENST00000456572 344 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 BTF3P5-201ENST00000457252 467 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 RN7SL860P-201ENST00000473738 223 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 RPL12P20-201ENST00000475538 479 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 HMGB1P36-201ENST00000487709 576 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC096751.1-202ENST00000502691 1067 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC139783.2-201ENST00000504847 1145 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC093840.1-201ENST00000511599 336 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC104057.1-201ENST00000515547 497 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC008694.2-201ENST00000517591 306 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 IGLV3-26-201ENST00000520756 302 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC124068.1-201ENST00000563131 678 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 PRELID3BP8-201ENST00000604148 295 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC008498.1-201ENST00000613012 531 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC018755.4-201ENST00000619715 454 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AL359740.1-201ENST00000624340 592 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 U3.53-201ENST00000628922 216 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC093591.3-201ENST00000634516 308 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC026951.1-201ENST00000559530 2459 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS50Q96JG6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS50Q96JG6 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.39□□□□□ -1.71
VPS50Q96JG6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS50Q96JG6 AC010928.1-201ENST00000592477 1447 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS50Q96JG6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS50Q96JG6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS50Q96JG6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS50Q96JG6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS50Q96JG6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 RNU5E-5P-201ENST00000365379 116 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 RNU6-1215P-201ENST00000384441 102 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 RNU6-297P-201ENST00000384636 107 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 MIR3074-201ENST00000384885 81 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 MIR129-1-201ENST00000384972 72 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms