Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 MDM4-202ENST00000367180 547 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 U3.22-201ENST00000391120 215 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AL606923.1-201ENST00000406616 190 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 RN7SKP126-201ENST00000411143 300 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC096644.2-201ENST00000429278 159 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AL035666.1-201ENST00000446195 348 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC004980.3-201ENST00000447046 365 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC008033.2-201ENST00000542626 177 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 SULT1C2P1-202ENST00000562418 459 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 MIR5690-201ENST00000583739 73 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 SNORD39.3-201ENST00000584451 71 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC022893.3-201ENST00000607665 437 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AC006133.1-201ENST00000617106 264 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 KPNA2P2-201ENST00000419546 1489 ntBASIC9.13□□□□□ -0.95
TRIM41Q8WV44 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM41Q8WV44 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 ZNF807-201ENST00000328088 1707 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AL512646.1-201ENST00000269395 1077 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 RNU4-48P-201ENST00000365559 182 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 HMGB3P2-201ENST00000411913 584 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 RPL34P6-201ENST00000432390 345 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC010881.1-201ENST00000433830 235 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 RNA5SP373-201ENST00000517271 95 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 HMGB1P19-201ENST00000517578 577 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AP001804.3-201ENST00000525146 880 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC069307.1-201ENST00000602820 447 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AL391358.1-201ENST00000605342 190 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC007546.1-201ENST00000619452 559 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 OR55B1P-203ENST00000641518 2602 ntBASIC9.12□□□□□ -0.95
TRIM41Q8WV44 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM41Q8WV44 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AC097504.1-201ENST00000515103 2415 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 Y_RNA.135-201ENST00000363439 95 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 RNA5-8SP7-201ENST00000363443 155 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 RNU6-379P-201ENST00000363813 104 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 Y_RNA.530-201ENST00000384587 101 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 DBIP1-201ENST00000401435 260 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 OR4K11P-201ENST00000431829 904 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 PRPS1P1-201ENST00000445305 876 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 MTCO3P10-201ENST00000455912 772 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AC011005.3-201ENST00000491624 395 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 HSPD1P15-201ENST00000505573 1122 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AC091912.1-201ENST00000511351 248 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 SNORA67.7-201ENST00000516664 135 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AP000907.2-201ENST00000530827 353 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 MIR4790-201ENST00000577799 79 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 OR4K8P-201ENST00000578842 1048 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 MIR4444-1-201ENST00000581696 74 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 MIR4444-2-201ENST00000584390 74 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 AL022099.1-201ENST00000604551 712 ntBASIC9.11□□□□□ -0.95
TRIM41Q8WV44 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM41Q8WV44 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms