Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 SNORA70E-201ENST00000384492 135 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 MIR181B1-201ENST00000385240 110 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 RNA5SP425-201ENST00000410336 112 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 RNU2-6P-201ENST00000411404 190 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 RAP1BP1-201ENST00000412709 553 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AL512504.1-201ENST00000415494 778 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AL034379.1-201ENST00000423216 253 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 HMGB3P10-201ENST00000434734 572 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 MTND2P21-201ENST00000436242 1042 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 RPL7P12-201ENST00000446719 750 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 RPL21P18-201ENST00000469899 480 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AC025181.1-201ENST00000477507 416 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 HIGD1AP13-201ENST00000509878 289 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AC106734.1-201ENST00000568646 663 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AL162233.1-201ENST00000620014 944 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AL049780.3-201ENST00000624612 1583 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 SNORA67.4-201ENST00000384688 142 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 MIR196B-201ENST00000384852 84 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 OR2B8P-201ENST00000432841 938 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 MTCYBP29-201ENST00000436327 1006 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AL049829.1-201ENST00000465411 156 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AC078817.1-201ENST00000492623 435 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 RN7SKP34-201ENST00000516142 244 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AC067904.2-201ENST00000517322 1283 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 ATP5F1P5-201ENST00000526403 760 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AL096803.3-201ENST00000609032 532 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AL512643.1-201ENST00000635735 524 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 AC109315.1-201ENST00000584143 1347 ntBASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.82□□□□□ -1.96
SHROOM3Q8TF72 Z73965.1-201ENST00000623412 2297 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RNU6-1251P-201ENST00000364502 107 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 PTP4A1P1-201ENST00000420539 515 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC093151.1-201ENST00000427711 313 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 CBX1P4-201ENST00000439415 457 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RN7SL330P-201ENST00000469709 307 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC090543.1-201ENST00000492168 485 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC005921.1-201ENST00000510589 286 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RNU6-889P-201ENST00000517189 103 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC138761.3-201ENST00000579993 334 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 HMGB1P51-201ENST00000605166 638 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 CR589904.2-201ENST00000612533 440 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RNA5SP289-201ENST00000362332 137 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RNA5SP68-201ENST00000363885 119 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RNU6-40P-201ENST00000384254 107 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 SNORD65-201ENST00000391079 73 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RN7SKP223-201ENST00000410582 62 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 NDUFB4P5-201ENST00000415445 361 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RN7SL283P-201ENST00000489055 303 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 LINC00557-201ENST00000563184 1279 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms