Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAF3IP1Q8TDR0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 NUP58P1-201ENST00000502546 1738 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC107982.1-201ENST00000507171 1300 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 RNU6-263P-201ENST00000363811 107 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 SNORD82-201ENST00000365530 70 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 MIR607-201ENST00000385241 96 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 RNU6-821P-201ENST00000390995 107 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 ARF4P3-201ENST00000397387 509 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 RN7SKP263-201ENST00000411194 309 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 NANOGP2-201ENST00000435391 727 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AL589880.1-201ENST00000448271 287 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 NUTF2P7-201ENST00000453086 375 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 UBDP1-202ENST00000457888 382 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AL133162.1-201ENST00000463228 453 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 NCOR1P1-202ENST00000486162 291 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 OR10V3P-201ENST00000525712 725 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC023161.2-201ENST00000551218 780 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 MTCYBP23-201ENST00000558717 1102 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 HSPE1P5-201ENST00000561489 272 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC022916.3-201ENST00000592961 742 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 RPP40P2-201ENST00000603596 712 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC067959.1-201ENST00000604334 379 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC124312.4-201ENST00000605533 310 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AL732618.1-201ENST00000623251 301 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 MTND2P41-201ENST00000637599 773 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC091152.2-201ENST00000591628 2569 ntBASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAF3IP1Q8TDR0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 RNU5D-1-201ENST00000363299 116 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 RNU6-283P-201ENST00000364788 107 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC016769.3-201ENST00000396562 315 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 EI24P2-201ENST00000397776 1076 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AP000567.1-201ENST00000406413 156 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC127526.1-201ENST00000417526 366 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 GTF2IP23-201ENST00000423746 351 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 RPL21P112-201ENST00000434403 463 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC004854.1-201ENST00000440356 349 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 ELOCP13-201ENST00000443934 329 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC092754.2-201ENST00000463506 460 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC114322.1-201ENST00000506771 926 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC010460.2-201ENST00000509054 677 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 MTCYBP41-201ENST00000528913 1123 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC015688.2-201ENST00000584523 262 ntBASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAF3IP1Q8TDR0 RPL23AP92-201ENST00000603609 255 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms