Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC118273.2-201ENST00000532092 465 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 YPEL5P3-201ENST00000547227 352 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC025627.2-201ENST00000576220 160 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC011471.1-201ENST00000585766 187 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AL159169.3-201ENST00000608871 561 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC025253.1-201ENST00000613623 543 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC006840.1-201ENST00000623069 542 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 ELF2P3-201ENST00000445099 1506 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AL079343.1-201ENST00000572358 1771 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 TEX21P-201ENST00000447107 1476 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC024560.2-201ENST00000507981 1497 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 MTND5P26-201ENST00000426018 1752 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 ZNF285B-201ENST00000561698 1767 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 SAMMSON-213ENST00000641336 1521 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 Y_RNA.813-201ENST00000364639 102 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 RNU6-317P-201ENST00000384031 107 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 SNORD115-47-201ENST00000391226 86 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC007066.1-201ENST00000392902 381 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 RN7SKP156-201ENST00000410308 342 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 VDAC1P9-201ENST00000412766 841 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 USP9YP6-201ENST00000413550 854 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 RBMY1KP-201ENST00000423480 476 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 OR4F13P-201ENST00000428478 931 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 YWHAQP9-201ENST00000445891 512 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 VN1R10P-201ENST00000447106 875 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 USP9YP34-201ENST00000453983 808 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 DNAJC19P1-201ENST00000455312 319 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 AMD1P1-201ENST00000457220 922 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 ARPC3P2-201ENST00000457786 533 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 MTND6P6-201ENST00000478031 263 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 ACTG1P13-201ENST00000486987 1043 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 FAM92A1P2-202ENST00000504766 877 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 PRDX4P1-201ENST00000507189 574 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 RNU6-507P-201ENST00000516045 100 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC091167.4-201ENST00000605079 184 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC024560.3-201ENST00000608482 349 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 AC012360.2-201ENST00000609349 391 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 ATE1-AS1-202ENST00000636460 506 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.04□□□□□ -1.6
SYNE4Q8N205 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNE4Q8N205 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SYNE4Q8N205 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNE4Q8N205 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC016716.1-201ENST00000265882 708 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNE4Q8N205 RNU1-15P-201ENST00000353977 144 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 RN7SKP226-201ENST00000364912 300 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms