Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC122718.1-201ENST00000439448 744 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AL096829.2-201ENST00000446582 742 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC008379.1-201ENST00000463655 464 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 FAM133DP-201ENST00000464802 691 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC008628.1-201ENST00000508663 265 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 HMGN1P15-201ENST00000513870 295 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC113192.3-201ENST00000529152 742 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 SYF2P1-201ENST00000550658 413 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC005412.1-201ENST00000580812 1049 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC007566.2-201ENST00000603642 413 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AL109618.2-201ENST00000605527 211 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC090425.2-201ENST00000608818 501 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AP005229.2-201ENST00000609980 697 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC005156.1-201ENST00000613371 573 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AL121594.5-201ENST00000631724 573 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AL355578.1-201ENST00000607405 1328 ntBASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC50Q8IVM0 AC117529.2-201ENST00000512159 2068 ntBASIC3.4□□□□□ -1.86
CCDC50Q8IVM0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.4□□□□□ -1.86
CCDC50Q8IVM0 RNU6-353P-201ENST00000364266 108 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 RNU6-354P-201ENST00000383862 107 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 RNU6-610P-201ENST00000384264 107 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 OR51B8P-201ENST00000449892 769 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 UQCRHP3-201ENST00000451503 251 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC109471.1-201ENST00000511631 612 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 RNU1-143P-201ENST00000516296 146 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC026403.1-201ENST00000518938 295 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AP001207.2-201ENST00000519490 539 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC007458.1-201ENST00000542812 373 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 CR383656.14-201ENST00000551951 406 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC034105.4-201ENST00000568304 277 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 MIR5186-201ENST00000577504 120 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AL158211.2-201ENST00000607282 395 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC013468.1-201ENST00000608680 598 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 U1.23-201ENST00000610293 146 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AL157817.1-201ENST00000614264 790 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 RNU1-68P-201ENST00000615382 146 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 U1.39-201ENST00000621562 146 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC092184.1-201ENST00000625042 715 ntBASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC50Q8IVM0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 RNA5SP50-201ENST00000363731 107 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 SNORA62.3-201ENST00000365110 153 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 U6.112-201ENST00000384129 70 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 MIR490-201ENST00000384865 128 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 RNU6-932P-201ENST00000391108 106 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 FABP12P1-201ENST00000401911 322 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 SFR1P1-201ENST00000403720 688 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 OR51A3P-201ENST00000413596 924 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 TAF13P2-201ENST00000416876 286 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms