Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP48Q86UV5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
USP48Q86UV5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.86□□□□□ -1.47
USP48Q86UV5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
USP48Q86UV5 FRG1BP-201ENST00000278882 761 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP48Q86UV5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP48Q86UV5 Y_RNA.453-201ENST00000384223 109 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.86□□□□□ -1.47
USP48Q86UV5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP48Q86UV5 CCNG1P1-201ENST00000406783 885 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 MIR1271-201ENST00000408537 86 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 RPS15AP40-201ENST00000419621 391 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 MTCYBP24-201ENST00000420387 1106 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AL109913.1-201ENST00000421173 514 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.86□□□□□ -1.47
USP48Q86UV5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
USP48Q86UV5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.86□□□□□ -1.47
USP48Q86UV5 FCF1P1-201ENST00000432690 571 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.86□□□□□ -1.47
USP48Q86UV5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.86□□□□□ -1.47
USP48Q86UV5 RPL12P18-201ENST00000437175 325 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 RPS29P9-201ENST00000440360 171 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.86□□□□□ -1.47
USP48Q86UV5 MTND2P24-201ENST00000453434 806 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AP1S2P1-201ENST00000457344 379 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.86□□□□□ -1.47
USP48Q86UV5 RNA5SP103-201ENST00000459503 118 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AC041039.1-201ENST00000485656 536 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AC019235.1-201ENST00000503847 207 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
USP48Q86UV5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.86□□□□□ -1.47
USP48Q86UV5 AC114781.4-201ENST00000513707 639 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AC016065.2-201ENST00000514530 444 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 RNA5SP249-201ENST00000516127 99 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.86□□□□□ -1.47
USP48Q86UV5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.86□□□□□ -1.47
USP48Q86UV5 FAM92A1P1-201ENST00000528023 890 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AP003181.2-201ENST00000528941 181 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.86□□□□□ -1.47
USP48Q86UV5 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.86□□□□□ -1.47
USP48Q86UV5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.86□□□□□ -1.47
USP48Q86UV5 AC007224.1-201ENST00000564410 144 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 AP005119.2-201ENST00000579735 1105 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.86□□□□□ -1.47
USP48Q86UV5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.86□□□□□ -1.47
USP48Q86UV5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.86□□□□□ -1.47
USP48Q86UV5 FAM27B-201ENST00000610601 213 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP48Q86UV5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.86□□□□□ -1.47
USP48Q86UV5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP48Q86UV5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP48Q86UV5 AC092125.1-201ENST00000562568 1995 ntBASIC5.86□□□□□ -1.47
USP48Q86UV5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.85□□□□□ -1.47
USP48Q86UV5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP48Q86UV5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP48Q86UV5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.85□□□□□ -1.47
USP48Q86UV5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP48Q86UV5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP48Q86UV5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP48Q86UV5 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 SNORD82-201ENST00000365530 70 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 CALM2P3-201ENST00000400429 449 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.85□□□□□ -1.47
USP48Q86UV5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.85□□□□□ -1.47
USP48Q86UV5 FABP7P1-201ENST00000424004 391 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 PSMA6P3-201ENST00000428242 164 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AC073464.1-201ENST00000429823 534 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 MTND3P23-201ENST00000431980 347 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AC016831.4-201ENST00000438302 307 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AL591623.2-201ENST00000449978 222 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AC092001.1-201ENST00000453012 261 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 C1DP4-201ENST00000455429 424 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 RPL7P15-201ENST00000461190 712 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AC109327.1-201ENST00000471666 403 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 RPS3AP14-201ENST00000483907 780 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.85□□□□□ -1.47
USP48Q86UV5 AC009646.1-201ENST00000510455 318 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.85□□□□□ -1.47
USP48Q86UV5 OR5AQ1P-201ENST00000527596 927 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP48Q86UV5 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.85□□□□□ -1.47
USP48Q86UV5 AC068831.4-201ENST00000556118 109 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.85□□□□□ -1.47
USP48Q86UV5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.85□□□□□ -1.47
USP48Q86UV5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.85□□□□□ -1.47
USP48Q86UV5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.85□□□□□ -1.47
USP48Q86UV5 AC011816.2-201ENST00000607089 556 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.85□□□□□ -1.47
USP48Q86UV5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.85□□□□□ -1.47
USP48Q86UV5 AC009159.1-201ENST00000618386 642 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AC015908.5-201ENST00000623289 343 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 SALL4P2-201ENST00000423288 2910 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 Z95327.2-201ENST00000414579 1873 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 AL031595.2-201ENST00000624215 19071 ntBASIC5.85□□□□□ -1.47
USP48Q86UV5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP48Q86UV5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
USP48Q86UV5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
USP48Q86UV5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms