Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 DNM1P47-203ENST00000571780 12667 ntBASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.97□□□□□ -1.45
LYSMD3Q7Z3D4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD3Q7Z3D4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD3Q7Z3D4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
LYSMD3Q7Z3D4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD3Q7Z3D4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD3Q7Z3D4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD3Q7Z3D4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 SELENOWP1-201ENST00000322792 252 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 RNA5SP273-201ENST00000362484 113 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 RNA5SP477-201ENST00000362639 119 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 Y_RNA.270-201ENST00000364693 104 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 RNU5E-6P-201ENST00000365574 115 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC110754.1-201ENST00000399740 601 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC096664.2-201ENST00000411843 406 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AL590399.2-201ENST00000427536 309 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AL445928.1-201ENST00000435545 222 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 GEMIN2P1-201ENST00000454246 752 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 PLGLA-201ENST00000465668 449 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC006967.1-201ENST00000467608 589 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 RN7SL193P-201ENST00000491708 276 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 CEACAMP10-202ENST00000495431 496 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 PGAM1P13-201ENST00000507497 754 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC022868.1-201ENST00000517767 391 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC040926.1-201ENST00000530195 238 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC106782.4-201ENST00000568264 210 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 MIR6862-1-201ENST00000613016 70 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 MIR6862-2-201ENST00000614755 70 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AC091925.2-201ENST00000625059 256 ntBASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD3Q7Z3D4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 SNORD62.1-201ENST00000362541 86 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 RNU6-1059P-201ENST00000363752 98 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 Y_RNA.314-201ENST00000365114 102 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 Y_RNA.518-201ENST00000384552 113 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 PPIAP9-201ENST00000403866 498 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 PPIAP13-201ENST00000434706 478 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AC016696.1-201ENST00000446949 318 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 RNU7-59P-201ENST00000459101 61 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 SNORA14.1-201ENST00000516113 141 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 SCARNA18.1-201ENST00000516330 83 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 IGKV3D-34-201ENST00000522638 302 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AC091516.1-201ENST00000549191 703 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 MIR4776-2-201ENST00000580204 80 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 MIR3133-201ENST00000583157 78 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 MIR5188-201ENST00000583467 113 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AC009779.6-201ENST00000603972 165 ntBASIC5.95□□□□□ -1.46
LYSMD3Q7Z3D4 AC145423.1-201ENST00000605712 336 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms