Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 COX6CP17-201ENST00000421389 185 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 RPS27AP7-201ENST00000422792 455 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 GLRXP1-201ENST00000423261 334 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 RPL7AP25-201ENST00000423357 805 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 OR51AB1P-201ENST00000429046 620 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 RPL37P21-201ENST00000435890 276 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC127537.2-201ENST00000439258 465 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 GDI2P2-201ENST00000445131 608 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 PAXBP1P1-201ENST00000449315 447 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 CEACAMP6-201ENST00000452007 574 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC006517.1-201ENST00000480485 328 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC083982.1-201ENST00000485679 344 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC106872.3-201ENST00000495104 446 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC104164.2-201ENST00000496953 495 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC109458.1-201ENST00000508858 316 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC034159.1-201ENST00000513885 583 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AP001180.3-201ENST00000582221 145 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 BBIP1P1-201ENST00000602999 279 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 PRELID3BP8-201ENST00000604148 295 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC100793.4-201ENST00000613683 429 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC027807.2-201ENST00000616099 408 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 MIR7702-201ENST00000621931 59 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AL356473.1-201ENST00000406203 1408 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 LINC02471-203ENST00000641941 4752 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHFQ7M4L6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHFQ7M4L6 OR11H4-201ENST00000315409 1082 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 RNU6-1119P-201ENST00000384349 108 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 RNU6-769P-201ENST00000384407 104 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 Y_RNA.505-201ENST00000384489 102 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 MIR1305-201ENST00000408300 86 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC012065.2-201ENST00000421295 375 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHFQ7M4L6 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC096638.2-201ENST00000434965 711 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 HSPE1P28-201ENST00000443139 211 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 HMGB3P22-202ENST00000451823 572 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 RPL5P32-201ENST00000454085 879 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 DNAJC19P1-201ENST00000455312 319 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 OR6K1P-201ENST00000456766 971 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 RPL21P126-201ENST00000470049 478 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC106872.2-201ENST00000494303 480 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 OR5H5P-201ENST00000503164 928 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC022447.3-201ENST00000506865 495 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 MTCO3P44-201ENST00000510977 541 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC005798.1-201ENST00000513715 387 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC116347.2-201ENST00000514912 523 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms