Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 RNU1-82P-201ENST00000390851 165 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 BTBD10P2-201ENST00000404779 676 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 DPPA2P3-201ENST00000411853 655 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC022028.1-201ENST00000412054 408 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC114755.2-201ENST00000413520 361 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC004987.3-201ENST00000413879 771 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 SPA17P1-201ENST00000416656 452 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 MTATP6P27-201ENST00000416987 621 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 RPL36AP36-201ENST00000418616 301 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL590233.1-201ENST00000430017 456 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 RPEP2-201ENST00000432149 701 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 MTND3P21-201ENST00000433774 331 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL596276.1-201ENST00000434465 418 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 RABEPKP1-201ENST00000440529 1026 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 FAM103A2P-201ENST00000444122 354 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC112498.1-201ENST00000444401 332 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 snoU13.20-201ENST00000459180 104 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC087312.1-201ENST00000471411 480 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC025164.1-201ENST00000496249 478 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC091868.1-201ENST00000508746 304 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 VWA8P1-201ENST00000510889 176 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 RNU6-1178P-201ENST00000516674 107 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC090151.1-201ENST00000520784 730 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC124947.2-202ENST00000552735 133 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC053481.3-201ENST00000577881 843 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 HMGN1P30-201ENST00000589286 268 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC025588.3-201ENST00000604182 274 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL359999.1-201ENST00000604513 294 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC090970.3-201ENST00000612566 866 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 MIR6862-1-201ENST00000613016 70 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AL512624.1-201ENST00000613638 469 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 MIR6862-2-201ENST00000614755 70 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 MIR6826-201ENST00000617808 98 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC072046.2-201ENST00000618366 268 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 MIR7154-201ENST00000620673 73 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 C2orf27A-204ENST00000623058 969 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 CR381653.2-201ENST00000624041 768 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 AC097714.1-201ENST00000511272 1647 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 SNORA51.1-201ENST00000363243 140 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 RNU1-130P-201ENST00000363930 160 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 BTF3P7-201ENST00000407097 488 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 FCF1P10-201ENST00000407590 479 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 Y_RNA.604-201ENST00000410574 102 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 RNU6-195P-201ENST00000411352 109 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 BX295541.1-201ENST00000417774 250 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 AL732292.1-201ENST00000426692 226 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 PSMA6P3-201ENST00000428242 164 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 RPL23AP25-201ENST00000430973 463 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 AC009961.2-201ENST00000435771 251 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 AL356276.2-201ENST00000435919 558 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 AURKAPS2-201ENST00000454983 333 ntBASIC4.22□□□□□ -1.73
PTCHD4Q6ZW05 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms