Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC105313.1-201ENST00000509121 353 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 HSPE1P23-201ENST00000509838 286 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 RN7SKP21-201ENST00000516503 220 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 RNA5SP164-201ENST00000516533 110 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 Y_RNA.688-201ENST00000516565 95 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 OR5AK1P-201ENST00000524837 922 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 ZNF705CP-201ENST00000530515 889 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 ELOCP32-201ENST00000548625 324 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC090502.2-201ENST00000549267 280 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC090616.2-202ENST00000584248 222 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC067959.1-201ENST00000604334 379 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC018714.1-201ENST00000605028 208 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 HMGB1P50-201ENST00000605814 607 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC113194.1-201ENST00000606037 500 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC004223.4-201ENST00000612426 332 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AL136981.2-201ENST00000617319 734 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 MIR3974-201ENST00000637126 96 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 FAM157B-203ENST00000639350 358 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC026951.1-201ENST00000559530 2459 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 MAPK10-372ENST00000641954 3413 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 RNU6-1200P-201ENST00000384162 107 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 MIR199A2-201ENST00000385289 110 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 ATP5F1P4-201ENST00000397288 746 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 HLFP1-201ENST00000402375 499 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 RNU2-28P-201ENST00000410457 189 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 PIGPP2-201ENST00000411569 458 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 MTCYBP38-201ENST00000417160 1123 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AL022400.1-201ENST00000423946 935 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 RPL7P2-201ENST00000427639 268 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 NPM1P34-201ENST00000428821 893 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 TRBV26-201ENST00000456572 344 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 VN1R105P-201ENST00000486595 910 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 RN7SL323P-201ENST00000494712 295 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AC006499.2-201ENST00000513470 337 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 RNY4P37-201ENST00000516225 96 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 CYCSP30-201ENST00000546447 172 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 MIR4644-201ENST00000579929 84 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 VN1R92P-201ENST00000598511 928 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 HSPE1P14-201ENST00000605812 302 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AC092650.2-201ENST00000619984 902 ntBASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE3Q6ZMZ3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AP001486.2-201ENST00000561652 5113 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC009518.2-201ENST00000418056 731 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 KCTD10P1-201ENST00000434203 625 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC097262.1-201ENST00000452559 548 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC098824.1-201ENST00000453565 980 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 DNAJC19P1-201ENST00000455312 319 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC087385.1-201ENST00000475062 312 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms