Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTR9Q6PD62 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTR9Q6PD62 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTR9Q6PD62 Y_RNA.333-201ENST00000365274 102 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTR9Q6PD62 MIR591-201ENST00000385290 95 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 SNORA48.8-201ENST00000391324 134 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 BTF3P8-201ENST00000414577 526 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC106883.1-201ENST00000418805 562 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AL158156.1-201ENST00000422509 473 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 C1DP1-201ENST00000426049 402 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AL031736.2-201ENST00000426573 787 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC096992.1-201ENST00000459808 709 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC087312.1-201ENST00000471411 480 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 RPS4XP22-201ENST00000480755 780 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC021146.5-201ENST00000503544 545 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC005921.1-201ENST00000510589 286 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC004217.3-201ENST00000551552 878 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 MIR4738-201ENST00000579134 87 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AL031985.2-201ENST00000600955 480 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AL020997.3-201ENST00000602843 359 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AL159169.3-201ENST00000608871 561 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC027449.1-201ENST00000608890 407 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 VN1R74P-201ENST00000613259 503 ntBASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.06□□□□□ -1.76
CTR9Q6PD62 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTR9Q6PD62 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTR9Q6PD62 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 RNA5SP197-201ENST00000363357 119 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 OR1L1-202ENST00000373686 1083 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 SNORA51.12-201ENST00000384448 134 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTR9Q6PD62 RNA5SP293-201ENST00000410527 113 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 RNU6-575P-201ENST00000411326 105 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 MTCO2P8-201ENST00000412213 658 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 PAICSP7-201ENST00000419829 962 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC005326.1-201ENST00000429197 123 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 AL358794.1-201ENST00000445689 381 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 EXOSC3P1-201ENST00000448649 500 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 NAP1L1P3-201ENST00000462291 880 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 RPL21P103-201ENST00000479921 488 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC126121.1-201ENST00000482313 553 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 HMGB1P21-201ENST00000502313 581 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 GTF2IP9-201ENST00000502460 301 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 FCF1P8-201ENST00000510322 597 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 OR4A2P-201ENST00000527276 913 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC011611.1-201ENST00000552179 197 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 BNIP3P38-201ENST00000601117 544 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC011468.4-201ENST00000603942 409 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC002487.1-201ENST00000604565 994 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTR9Q6PD62 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTR9Q6PD62 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 AC106754.1-201ENST00000562632 1513 ntBASIC4.05□□□□□ -1.76
CTR9Q6PD62 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.05□□□□□ -1.76
CTR9Q6PD62 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms