Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC073387.2-201ENST00000604797 784 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AL391497.1-201ENST00000608671 547 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AP001521.1-201ENST00000609150 300 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AL590240.3-201ENST00000621416 943 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 U6.98-201ENST00000637157 84 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC106858.1-201ENST00000637497 429 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AP000553.6-201ENST00000641242 118 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 PRO1804-201ENST00000623780 2050 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AL049780.3-201ENST00000624612 1583 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AL645568.2-201ENST00000432815 1337 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 RNA5SP295-201ENST00000362655 121 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 RNU6-224P-201ENST00000384055 107 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 RNU6-298P-201ENST00000390888 96 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC025750.1-201ENST00000399891 379 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 MTHFD2P2-201ENST00000407725 247 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 RN7SKP159-201ENST00000410657 292 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC012065.2-201ENST00000421295 375 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 OSTCP5-201ENST00000425293 453 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 PNPLA4P1-201ENST00000458328 305 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 snoU109.4-201ENST00000458953 143 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC069528.1-202ENST00000482888 637 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 FCF1P3-201ENST00000496394 590 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC006390.1-201ENST00000508068 283 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC010460.2-201ENST00000509054 677 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC026412.2-201ENST00000512270 1075 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC112206.4-201ENST00000515142 405 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AP003102.1-201ENST00000525638 661 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC023161.2-201ENST00000551218 780 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 GTF2IP8-201ENST00000560687 584 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AC138915.2-201ENST00000569776 97 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AL365503.1-201ENST00000605247 905 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AL391261.4-201ENST00000616012 481 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 PWAR6-201ENST00000552334 4618 ntBASIC3.28□□□□□ -1.88
NIPAL3Q6P499 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NIPAL3Q6P499 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
NIPAL3Q6P499 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NIPAL3Q6P499 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NIPAL3Q6P499 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NIPAL3Q6P499 Y_RNA.25-201ENST00000362528 102 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NIPAL3Q6P499 RNU6-1074P-201ENST00000383995 104 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 RPL7P60-201ENST00000397636 735 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.27□□□□□ -1.89
NIPAL3Q6P499 RN7SKP285-201ENST00000410137 318 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 RNU2-15P-201ENST00000410692 191 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.27□□□□□ -1.89
NIPAL3Q6P499 AC092447.6-201ENST00000414578 210 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.27□□□□□ -1.89
NIPAL3Q6P499 AC099677.1-201ENST00000420575 175 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 AL159169.1-201ENST00000421119 127 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.27□□□□□ -1.89
NIPAL3Q6P499 AC012497.1-201ENST00000429392 575 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 AL158071.1-201ENST00000430315 461 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 AL445584.1-201ENST00000431451 330 ntBASIC3.27□□□□□ -1.89
NIPAL3Q6P499 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms