Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RPL7P50-201ENST00000600588 727 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC078795.2-201ENST00000602835 1252 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL121932.1-201ENST00000605542 214 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RNU6-87P-201ENST00000607561 108 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AP001521.2-201ENST00000608772 546 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC006566.1-201ENST00000608943 513 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 TUG1_1.1-201ENST00000610654 145 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 MIR6826-201ENST00000617808 98 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL022401.1-201ENST00000619498 108 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL158801.5-201ENST00000623123 465 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC099654.13-201ENST00000639774 207 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC095050.2-201ENST00000510748 1458 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 RNU6-248P-201ENST00000410720 107 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AL137014.1-201ENST00000420490 1226 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 BEND7P1-201ENST00000422058 457 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 USP9YP14-201ENST00000430663 563 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 RPS17P8-201ENST00000434525 335 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC244505.5-201ENST00000443639 207 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 RPL17P49-201ENST00000443728 411 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 RPL23AP56-201ENST00000460778 453 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 RPL7P15-201ENST00000461190 712 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 NPM1P41-201ENST00000512920 831 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 RN7SKP66-201ENST00000516681 231 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 RN7SKP147-201ENST00000517154 244 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC103783.1-201ENST00000520506 373 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 MIR3691-201ENST00000578066 90 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 MIR3682-201ENST00000581338 84 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC068790.3-201ENST00000602988 553 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC006254.3-201ENST00000603353 884 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC090948.1-201ENST00000607464 549 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC109347.2-201ENST00000610220 349 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 Z99129.1-201ENST00000612510 255 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 MIR6886-201ENST00000619864 61 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 MIR4727-201ENST00000622232 55 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AL161637.1-201ENST00000622380 412 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 AC084035.1-201ENST00000634543 607 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.44□□□□□ -1.7
RNF220Q5VTB9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF220Q5VTB9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 MTCO1P9-201ENST00000505577 1534 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 RNU6-1078P-201ENST00000364522 103 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 MIR765-201ENST00000390226 114 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 CCNG1P1-201ENST00000406783 885 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC114755.2-201ENST00000413520 361 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 HMGB3P23-201ENST00000414981 585 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 RAC1P3-201ENST00000416129 580 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 SPA17P1-201ENST00000416656 452 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC099677.1-201ENST00000420575 175 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AL031667.1-201ENST00000440222 725 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 MTND6P13-201ENST00000443510 523 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC104651.2-201ENST00000447549 528 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC073850.1-201ENST00000449243 255 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 HMGB3P30-201ENST00000457863 606 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms