Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ST13P14-201ENST00000474095 734 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC034244.2-201ENST00000514668 858 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC135628.1-201ENST00000568867 534 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 RNU1-91P-201ENST00000364746 163 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 CACYBPP2-201ENST00000453625 678 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC005840.1-201ENST00000498412 377 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC008507.1-201ENST00000587506 734 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
RIF1Q5UIP0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 MIR583-201ENST00000384846 75 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 RPL5P16-201ENST00000471467 790 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 AC104090.1-201ENST00000506341 1171 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 SNRPGP18-201ENST00000553000 214 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 AP000526.1-201ENST00000603308 1388 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 RNU6-707P-201ENST00000364647 95 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 RNU6-392P-201ENST00000364926 101 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 Z98742.2-201ENST00000431564 187 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 RPS6P4-201ENST00000494693 758 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 AC026412.2-201ENST00000512270 1075 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 MIR3199-1-201ENST00000582434 88 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 MIR4635-201ENST00000583759 79 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 SNORA4-201ENST00000584302 138 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 AP004372.1-201ENST00000604842 844 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 AC092628.2-201ENST00000622492 339 ntBASIC2.36□□□□□ -2.03
RIF1Q5UIP0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RIF1Q5UIP0 ELL2P4-201ENST00000446870 1376 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.35□□□□□ -2.03
RIF1Q5UIP0 MIR30E-201ENST00000362104 92 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 RPL21P75-201ENST00000396599 483 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 RPL21P1-201ENST00000399532 476 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 RPL21P28-201ENST00000401418 483 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 AL592114.1-201ENST00000403842 483 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RIF1Q5UIP0 AC068781.1-201ENST00000488231 618 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 RPL21P16-201ENST00000495531 483 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 NIPA2P2-201ENST00000496376 1083 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 ACTR6P1-201ENST00000514311 1104 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 SNORA31.1-201ENST00000515993 133 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 SNORA31.5-201ENST00000516190 133 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 CKS1BP7-201ENST00000522230 235 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 AC021269.2-201ENST00000532318 330 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 AC103710.2-201ENST00000609912 942 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 AL355493.4-201ENST00000618530 292 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.35□□□□□ -2.03
RIF1Q5UIP0 AC026523.2-201ENST00000625039 7739 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 RNA5SP107-201ENST00000411358 122 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.35□□□□□ -2.03
RIF1Q5UIP0 FAR1P1-201ENST00000427163 934 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 TRBV26-201ENST00000456572 344 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.35□□□□□ -2.03
RIF1Q5UIP0 AP003385.6-201ENST00000531603 374 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.35□□□□□ -2.03
RIF1Q5UIP0 MIR219B-201ENST00000637023 88 ntBASIC2.35□□□□□ -2.03
RIF1Q5UIP0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.34□□□□□ -2.03
RIF1Q5UIP0 HMGB1P25-201ENST00000468402 607 ntBASIC2.34□□□□□ -2.03
RIF1Q5UIP0 RNA5SP490-201ENST00000517141 136 ntBASIC2.34□□□□□ -2.03
RIF1Q5UIP0 AC126177.3-201ENST00000551839 688 ntBASIC2.34□□□□□ -2.03
RIF1Q5UIP0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.34□□□□□ -2.03
RIF1Q5UIP0 AC061975.8-201ENST00000587058 721 ntBASIC2.34□□□□□ -2.03
RIF1Q5UIP0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RIF1Q5UIP0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.34□□□□□ -2.03
RIF1Q5UIP0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
RIF1Q5UIP0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 RPL32P35-201ENST00000415214 394 ntBASIC2.34□□□□□ -2.04
RIF1Q5UIP0 SPA17P1-201ENST00000416656 452 ntBASIC2.34□□□□□ -2.04
RIF1Q5UIP0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 AL035551.1-201ENST00000446931 348 ntBASIC2.34□□□□□ -2.04
RIF1Q5UIP0 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 RN7SKP43-201ENST00000516173 320 ntBASIC2.34□□□□□ -2.04
RIF1Q5UIP0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 MFSD8-245ENST00000641743 948 ntBASIC2.34□□□□□ -2.04
RIF1Q5UIP0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
RIF1Q5UIP0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms