Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 RPL23AP49-201ENST00000492925 468 ntBASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 MTCYBP19-201ENST00000517463 1124 ntBASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.65□□□□□ -2.14
VPS13DQ5THJ4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 MIR21-201ENST00000362134 72 ntBASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 AC122134.1-201ENST00000565664 1104 ntBASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 MIR4635-201ENST00000583759 79 ntBASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 MIR3605-201ENST00000583214 100 ntBASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 AC007621.1-201ENST00000604544 437 ntBASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS13DQ5THJ4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AL356292.1-201ENST00000283110 373 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 SNORD6-201ENST00000365444 73 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AL606490.7-201ENST00000433136 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AL592437.1-201ENST00000443781 492 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC007677.1-201ENST00000445757 515 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC108860.1-201ENST00000484521 383 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC106872.3-201ENST00000495104 446 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 POU5F1P7-201ENST00000508759 541 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AP002770.2-201ENST00000543613 532 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC023813.4-201ENST00000607580 580 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC009318.2-201ENST00000610917 651 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 OR11H5P-202ENST00000641612 1325 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 SNORA70E-201ENST00000384492 135 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 SNORA64-201ENST00000384674 134 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AL162578.1-201ENST00000406202 378 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC105402.2-201ENST00000438503 358 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 MRPL50P4-201ENST00000446432 475 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 RPL21P99-201ENST00000480369 423 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC010680.4-201ENST00000605334 543 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC104454.1-201ENST00000421341 1401 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 SCN1A-220ENST00000641603 12506 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 RNU2-2P-201ENST00000410396 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 RNA5SP281-201ENST00000516504 135 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 AC061975.8-201ENST00000587058 721 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.15-201ENST00000611544 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.16-201ENST00000613119 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.12-201ENST00000613778 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.20-201ENST00000613956 192 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.9-201ENST00000615427 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.11-201ENST00000616345 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.2-201ENST00000616535 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.3-201ENST00000617785 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.19-201ENST00000618602 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 RNU2-1-201ENST00000618664 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.6-201ENST00000619225 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.5-201ENST00000619465 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 U2.10-201ENST00000620268 191 ntBASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.64□□□□□ -2.15
VPS13DQ5THJ4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 MIR489-201ENST00000384923 84 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 RNA5SP274-201ENST00000410484 108 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AC010378.1-201ENST00000619270 362 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms