Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.05□□□□□ -1.92
RFX4Q33E94 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.05□□□□□ -1.92
RFX4Q33E94 BNIP3P5-201ENST00000562290 498 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.05□□□□□ -1.92
RFX4Q33E94 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AL020997.2-201ENST00000602607 184 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 YWHAQP7-201ENST00000603536 658 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC112230.1-201ENST00000604342 547 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC016542.1-201ENST00000608259 493 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC018926.1-201ENST00000616335 435 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC080188.3-201ENST00000624842 748 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.05□□□□□ -1.92
RFX4Q33E94 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.05□□□□□ -1.92
RFX4Q33E94 AC117529.2-201ENST00000512159 2068 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RFX4Q33E94 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFX4Q33E94 MTND5P24-201ENST00000438892 1767 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.04□□□□□ -1.92
RFX4Q33E94 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RFX4Q33E94 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RFX4Q33E94 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RFX4Q33E94 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RFX4Q33E94 RNU6-1243P-201ENST00000364028 107 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 RNU6-619P-201ENST00000365146 108 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RFX4Q33E94 OR1L1-202ENST00000373686 1083 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 MIR16-1-201ENST00000385271 89 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 EIF5P1-201ENST00000400019 1231 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 BTBD10P2-201ENST00000404779 676 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AL138880.1-201ENST00000405824 642 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 RNU6-575P-201ENST00000411326 105 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC027644.1-201ENST00000419595 298 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.04□□□□□ -1.92
RFX4Q33E94 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.04□□□□□ -1.92
RFX4Q33E94 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.04□□□□□ -1.92
RFX4Q33E94 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC234064.1-201ENST00000436312 247 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.04□□□□□ -1.92
RFX4Q33E94 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC091179.1-201ENST00000461606 579 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC005726.1-201ENST00000494679 427 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC091860.1-201ENST00000505723 432 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC112206.4-201ENST00000515142 405 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC103843.2-201ENST00000530523 682 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.04□□□□□ -1.92
RFX4Q33E94 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.04□□□□□ -1.92
RFX4Q33E94 ZNF971P-201ENST00000562068 1249 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC106785.1-201ENST00000565935 262 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.04□□□□□ -1.92
RFX4Q33E94 MIR4474-201ENST00000579189 78 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC006116.7-201ENST00000590141 756 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.04□□□□□ -1.92
RFX4Q33E94 AL121772.2-201ENST00000614331 297 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC007275.1-201ENST00000621243 671 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AC006927.2-201ENST00000639256 389 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 AL365440.1-201ENST00000436135 2167 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RFX4Q33E94 AC011978.2-201ENST00000569835 2054 ntBASIC3.04□□□□□ -1.92
RFX4Q33E94 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFX4Q33E94 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFX4Q33E94 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RFX4Q33E94 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX4Q33E94 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFX4Q33E94 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RFX4Q33E94 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RFX4Q33E94 RNU1-64P-201ENST00000365443 163 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX4Q33E94 AL359837.1-201ENST00000381357 287 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 AL603865.2-201ENST00000401679 213 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 SFR1P1-201ENST00000403720 688 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 RNU6ATAC-201ENST00000408749 126 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX4Q33E94 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX4Q33E94 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX4Q33E94 TOMM22P1-201ENST00000418578 312 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX4Q33E94 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX4Q33E94 RPP40P1-201ENST00000426762 456 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX4Q33E94 DPPA2P1-201ENST00000428060 556 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 UBE2V1P1-201ENST00000430836 445 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 AL353705.1-201ENST00000433468 480 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX4Q33E94 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX4Q33E94 HIGD1AP11-201ENST00000438361 280 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX4Q33E94 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX4Q33E94 AC002542.1-201ENST00000440683 193 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 Z77249.1-201ENST00000444622 1175 ntBASIC3.03□□□□□ -1.92
RFX4Q33E94 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RFX4Q33E94 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX4Q33E94 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms