Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.81□□□□□ -1.8
GABPAQ06546 AC092634.2-201ENST00000428146 1010 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 HSFY7P-201ENST00000432672 318 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.81□□□□□ -1.8
GABPAQ06546 HSFY8P-201ENST00000437934 318 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.81□□□□□ -1.8
GABPAQ06546 RPL7P59-201ENST00000447700 943 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 HSFY5P-201ENST00000453726 309 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.81□□□□□ -1.8
GABPAQ06546 RPS15AP1-201ENST00000457423 391 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AC106872.2-201ENST00000494303 480 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 RPL7P47-201ENST00000497299 556 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 FTH1P9-201ENST00000513251 355 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 GMPSP1-201ENST00000514075 579 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.81□□□□□ -1.8
GABPAQ06546 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.81□□□□□ -1.8
GABPAQ06546 AC118942.1-201ENST00000529674 1035 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.81□□□□□ -1.8
GABPAQ06546 AC004024.1-201ENST00000549244 247 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AC087897.1-201ENST00000550134 156 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 VN1R92P-201ENST00000598511 928 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.81□□□□□ -1.8
GABPAQ06546 AC010680.4-201ENST00000605334 543 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.81□□□□□ -1.8
GABPAQ06546 AC105227.2-201ENST00000615075 605 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.81□□□□□ -1.8
GABPAQ06546 VN1R7P-201ENST00000619242 903 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 AC018692.3-201ENST00000623929 123 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
GABPAQ06546 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
GABPAQ06546 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.81□□□□□ -1.8
GABPAQ06546 AL139811.1-201ENST00000424779 2299 ntBASIC3.81□□□□□ -1.8
GABPAQ06546 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
GABPAQ06546 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GABPAQ06546 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GABPAQ06546 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
GABPAQ06546 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.8□□□□□ -1.8
GABPAQ06546 RNU6-575P-201ENST00000411326 105 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AC007899.1-201ENST00000412776 775 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GABPAQ06546 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.8□□□□□ -1.8
GABPAQ06546 AL513174.1-201ENST00000423182 629 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPAQ06546 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPAQ06546 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.8□□□□□ -1.8
GABPAQ06546 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.8□□□□□ -1.8
GABPAQ06546 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 RPL27AP5-201ENST00000469428 449 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AC087385.1-201ENST00000475062 312 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPAQ06546 SNORA19.3-201ENST00000516165 130 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 RN7SKP277-201ENST00000516895 283 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
GABPAQ06546 AC019227.1-201ENST00000526902 510 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 NDUFS5P6-201ENST00000529136 295 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.8□□□□□ -1.8
GABPAQ06546 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPAQ06546 AC006518.1-201ENST00000541449 943 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.8□□□□□ -1.8
GABPAQ06546 AC044913.1-201ENST00000557200 430 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.8□□□□□ -1.8
GABPAQ06546 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.8□□□□□ -1.8
GABPAQ06546 AL606834.3-201ENST00000602615 496 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AC073387.2-201ENST00000604797 784 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AC018754.1-201ENST00000607486 925 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AL513477.2-201ENST00000607858 568 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AP000238.1-201ENST00000608759 426 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 AC093673.2-201ENST00000609674 331 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.8□□□□□ -1.8
GABPAQ06546 AC018816.2-201ENST00000621460 353 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 FAM157B-203ENST00000639350 358 ntBASIC3.8□□□□□ -1.8
GABPAQ06546 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
GABPAQ06546 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.8□□□□□ -1.8
GABPAQ06546 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
GABPAQ06546 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GABPAQ06546 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GABPAQ06546 DCAF13P3-201ENST00000561147 1334 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AL353743.1-202ENST00000431724 1695 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GABPAQ06546 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GABPAQ06546 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GABPAQ06546 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
GABPAQ06546 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GABPAQ06546 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GABPAQ06546 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.79□□□□□ -1.8
GABPAQ06546 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.79□□□□□ -1.8
GABPAQ06546 MIR153-1-201ENST00000384914 90 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.79□□□□□ -1.8
GABPAQ06546 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.79□□□□□ -1.8
GABPAQ06546 ELOCP6-201ENST00000429066 328 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AL365396.1-201ENST00000430854 671 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 RPL23AP69-201ENST00000431134 458 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 RSL24D1P3-201ENST00000449255 495 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 NPM1P13-201ENST00000452663 865 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 MTATP6P14-201ENST00000455189 673 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 ELOCP12-201ENST00000458706 328 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms