Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TNFRSF17Q02223 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 FRG1CP-201ENST00000358464 769 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 MIR23A-201ENST00000385245 73 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 RPS3AP26-201ENST00000398259 784 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL136116.1-201ENST00000403591 381 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 GSTA8P-201ENST00000404253 637 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL139098.1-201ENST00000407291 389 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 RNU6-712P-201ENST00000410558 100 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 YPEL5P1-201ENST00000419731 367 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 GLRXP1-201ENST00000423261 334 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL451062.2-201ENST00000427515 271 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC234064.1-201ENST00000436312 247 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL158053.1-201ENST00000441503 453 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 PABPC1P3-201ENST00000469174 459 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 HMGN2P13-201ENST00000476476 274 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 RNA5SP135-201ENST00000517019 125 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AP000619.3-201ENST00000535634 1127 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC018630.1-201ENST00000541376 925 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 DUXAP6-201ENST00000553858 601 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL391156.1-201ENST00000554965 554 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 CYP2C60P-201ENST00000566088 139 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC053481.3-201ENST00000577881 843 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 BNIP3P38-201ENST00000601117 544 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AL355810.1-201ENST00000614629 552 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC022149.2-201ENST00000621061 203 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 AC111188.2-201ENST00000529697 1387 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 SGO1P2-201ENST00000429458 1589 ntBASIC3.32□□□□□ -1.88
TNFRSF17Q02223 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF17Q02223 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AL049780.3-201ENST00000624612 1583 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 U6.112-201ENST00000384129 70 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC109780.2-201ENST00000413467 845 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 TAF13P2-201ENST00000416876 286 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC068533.1-201ENST00000418542 415 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 MTND2P19-201ENST00000449129 1012 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC106707.2-201ENST00000484182 374 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 ACTG1P13-201ENST00000486987 1043 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC108078.3-201ENST00000502633 489 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 MIR4444-1-201ENST00000581696 74 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 MIR4444-2-201ENST00000584390 74 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC002487.1-201ENST00000604565 994 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC068831.7-201ENST00000616954 363 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC078880.5-201ENST00000617845 421 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC095031.1-201ENST00000623685 672 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
TNFRSF17Q02223 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TNFRSF17Q02223 NUP58P1-201ENST00000502546 1738 ntBASIC3.3□□□□□ -1.88
TNFRSF17Q02223 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFRSF17Q02223 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
TNFRSF17Q02223 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFRSF17Q02223 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms