Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC067747.1-201ENST00000608026 250 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AL450489.1-201ENST00000612071 468 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
HSPG2P98160 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
HSPG2P98160 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 AL139276.1-201ENST00000311910 1001 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.55□□□□□ -2.16
HSPG2P98160 ATP5J2P3-201ENST00000451550 258 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 RPL23AP49-201ENST00000492925 468 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AC112673.1-201ENST00000513168 575 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 RNA5SP281-201ENST00000516504 135 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 OR8L1P-201ENST00000534005 955 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AC103858.2-201ENST00000621471 543 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 CR381653.2-201ENST00000624041 768 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 METTL8-218ENST00000638989 876 ntTSL 5 BASIC1.55□□□□□ -2.16
HSPG2P98160 METTL8-219ENST00000640734 726 ntTSL 2 BASIC1.55□□□□□ -2.16
HSPG2P98160 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
HSPG2P98160 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HSPG2P98160 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.54□□□□□ -2.16
HSPG2P98160 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.54□□□□□ -2.16
HSPG2P98160 RN7SL75P-201ENST00000461926 281 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.54□□□□□ -2.16
HSPG2P98160 AC117522.2-201ENST00000510049 657 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 GNAI2P1-201ENST00000541815 315 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.54□□□□□ -2.16
HSPG2P98160 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 AP000526.1-201ENST00000603308 1388 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AL359893.1-201ENST00000447628 1580 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HSPG2P98160 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HSPG2P98160 RNU6-14P-201ENST00000384630 106 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.54□□□□□ -2.16
HSPG2P98160 AC106872.2-201ENST00000494303 480 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.54□□□□□ -2.16
HSPG2P98160 AC026464.5-201ENST00000562497 722 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC020895.1-201ENST00000595362 272 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HSPG2P98160 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
HSPG2P98160 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HSPG2P98160 MIR181B1-201ENST00000385240 110 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC007064.1-201ENST00000412238 351 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HSPG2P98160 ATG3P1-201ENST00000419507 911 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.54□□□□□ -2.16
HSPG2P98160 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.54□□□□□ -2.16
HSPG2P98160 RN7SKP282-201ENST00000516824 299 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HSPG2P98160 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.54□□□□□ -2.16
HSPG2P98160 AL110115.1-201ENST00000614396 364 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HSPG2P98160 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HSPG2P98160 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HSPG2P98160 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HSPG2P98160 AL590004.2-201ENST00000404787 371 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 RNA5SP270-201ENST00000411361 118 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 NPM1P49-201ENST00000448027 714 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.54□□□□□ -2.16
HSPG2P98160 AL008729.2-201ENST00000606393 473 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 AC103710.2-201ENST00000609912 942 ntBASIC1.54□□□□□ -2.16
HSPG2P98160 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.53□□□□□ -2.16
HSPG2P98160 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
HSPG2P98160 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
HSPG2P98160 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.53□□□□□ -2.16
HSPG2P98160 AC092436.3-201ENST00000511788 257 ntBASIC1.53□□□□□ -2.16
HSPG2P98160 AL133271.1-201ENST00000538229 291 ntBASIC1.53□□□□□ -2.16
HSPG2P98160 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.53□□□□□ -2.16
HSPG2P98160 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
HSPG2P98160 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.53□□□□□ -2.16
HSPG2P98160 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HSPG2P98160 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HSPG2P98160 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HSPG2P98160 RNA5SP107-201ENST00000411358 122 ntBASIC1.53□□□□□ -2.16
HSPG2P98160 RPL23AP16-201ENST00000441715 421 ntBASIC1.53□□□□□ -2.16
HSPG2P98160 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.53□□□□□ -2.16
HSPG2P98160 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.53□□□□□ -2.16
HSPG2P98160 RPL36AP51-201ENST00000487216 318 ntBASIC1.53□□□□□ -2.16
HSPG2P98160 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.53□□□□□ -2.16
HSPG2P98160 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HSPG2P98160 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
HSPG2P98160 MTND5P29-201ENST00000458676 1807 ntBASIC1.53□□□□□ -2.16
HSPG2P98160 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HSPG2P98160 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HSPG2P98160 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HSPG2P98160 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms