Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.21□□□□□ -1.9
TPM4P67936 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.21□□□□□ -1.9
TPM4P67936 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TPM4P67936 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TPM4P67936 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.21□□□□□ -1.9
TPM4P67936 RPS3AP26-201ENST00000398259 784 ntBASIC3.21□□□□□ -1.9
TPM4P67936 RPL7P10-201ENST00000417407 739 ntBASIC3.21□□□□□ -1.9
TPM4P67936 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.21□□□□□ -1.9
TPM4P67936 UBE2V1P1-201ENST00000430836 445 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.21□□□□□ -1.9
TPM4P67936 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.21□□□□□ -1.9
TPM4P67936 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.21□□□□□ -1.9
TPM4P67936 RPL27AP5-201ENST00000469428 449 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC068587.1-201ENST00000483613 781 ntBASIC3.21□□□□□ -1.9
TPM4P67936 DYNLL1P6-201ENST00000503440 264 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.21□□□□□ -1.9
TPM4P67936 RPL7L1P13-201ENST00000511702 739 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.21□□□□□ -1.9
TPM4P67936 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.21□□□□□ -1.9
TPM4P67936 HPRT1P3-201ENST00000539521 576 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC004486.1-201ENST00000546846 233 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.21□□□□□ -1.9
TPM4P67936 AC106785.1-201ENST00000565935 262 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.21□□□□□ -1.9
TPM4P67936 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC015871.2-201ENST00000603605 948 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AL009028.1-201ENST00000604895 802 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC231759.1-201ENST00000616455 597 ntBASIC3.21□□□□□ -1.9
TPM4P67936 AC024023.1-201ENST00000624530 922 ntBASIC3.21□□□□□ -1.9
TPM4P67936 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.21□□□□□ -1.9
TPM4P67936 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TPM4P67936 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TPM4P67936 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TPM4P67936 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TPM4P67936 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TPM4P67936 AL122126.1-201ENST00000546905 1318 ntBASIC3.2□□□□□ -1.9
TPM4P67936 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TPM4P67936 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
TPM4P67936 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
TPM4P67936 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TPM4P67936 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TPM4P67936 AC016769.2-201ENST00000414815 475 ntBASIC3.2□□□□□ -1.9
TPM4P67936 RAD23BP2-201ENST00000416003 1207 ntBASIC3.2□□□□□ -1.9
TPM4P67936 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM4P67936 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TPM4P67936 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.2□□□□□ -1.9
TPM4P67936 Z75741.1-201ENST00000446793 314 ntBASIC3.2□□□□□ -1.9
TPM4P67936 AC010301.1-201ENST00000473936 355 ntBASIC3.2□□□□□ -1.9
TPM4P67936 RN7SL297P-201ENST00000483161 293 ntBASIC3.2□□□□□ -1.9
TPM4P67936 OR2A20P-203ENST00000498397 1268 ntBASIC3.2□□□□□ -1.9
TPM4P67936 SNORA31.20-201ENST00000517111 133 ntBASIC3.2□□□□□ -1.9
TPM4P67936 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.2□□□□□ -1.9
TPM4P67936 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM4P67936 MIR3670-2-201ENST00000582974 65 ntBASIC3.2□□□□□ -1.9
TPM4P67936 MIR3670-1-201ENST00000584160 65 ntBASIC3.2□□□□□ -1.9
TPM4P67936 MIR3670-3-201ENST00000584855 65 ntBASIC3.2□□□□□ -1.9
TPM4P67936 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM4P67936 MIR3670-4-201ENST00000612260 65 ntBASIC3.2□□□□□ -1.9
TPM4P67936 AC006378.2-201ENST00000623178 2476 ntBASIC3.2□□□□□ -1.9
TPM4P67936 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TPM4P67936 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TPM4P67936 GABRG2-229ENST00000641017 3628 ntBASIC3.19□□□□□ -1.9
TPM4P67936 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPM4P67936 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPM4P67936 SNORA71.1-201ENST00000364523 117 ntBASIC3.19□□□□□ -1.9
TPM4P67936 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TPM4P67936 MIR200C-201ENST00000384980 68 ntBASIC3.19□□□□□ -1.9
TPM4P67936 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.19□□□□□ -1.9
TPM4P67936 MIR1303-201ENST00000408625 86 ntBASIC3.19□□□□□ -1.9
TPM4P67936 RPL7P8-201ENST00000411964 730 ntBASIC3.19□□□□□ -1.9
TPM4P67936 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.19□□□□□ -1.9
TPM4P67936 RFESDP1-201ENST00000422350 461 ntBASIC3.19□□□□□ -1.9
TPM4P67936 AC017015.1-201ENST00000477387 286 ntBASIC3.19□□□□□ -1.9
TPM4P67936 HMGB1P3-201ENST00000502802 616 ntBASIC3.19□□□□□ -1.9
TPM4P67936 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.19□□□□□ -1.9
TPM4P67936 AC019227.1-201ENST00000526902 510 ntBASIC3.19□□□□□ -1.9
TPM4P67936 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.19□□□□□ -1.9
TPM4P67936 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.19□□□□□ -1.9
TPM4P67936 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.19□□□□□ -1.9
TPM4P67936 MIR5680-201ENST00000577577 84 ntBASIC3.19□□□□□ -1.9
TPM4P67936 OR4G1P-201ENST00000588632 938 ntBASIC3.19□□□□□ -1.9
TPM4P67936 AC093227.2-201ENST00000589357 285 ntBASIC3.19□□□□□ -1.9
TPM4P67936 AL606834.2-201ENST00000602954 668 ntBASIC3.19□□□□□ -1.9
TPM4P67936 AP000787.2-201ENST00000604432 568 ntBASIC3.19□□□□□ -1.9
TPM4P67936 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.19□□□□□ -1.9
TPM4P67936 AC090897.3-201ENST00000636973 1157 ntBASIC3.19□□□□□ -1.9
TPM4P67936 MTND5P28-201ENST00000438005 1594 ntBASIC3.19□□□□□ -1.9
TPM4P67936 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.19□□□□□ -1.9
TPM4P67936 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPM4P67936 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 MIR26A1-201ENST00000362205 77 ntBASIC3.18□□□□□ -1.9
TPM4P67936 MIR592-201ENST00000384959 97 ntBASIC3.18□□□□□ -1.9
TPM4P67936 SFR1P1-201ENST00000403720 688 ntBASIC3.18□□□□□ -1.9
TPM4P67936 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 AC097713.2-201ENST00000430199 356 ntBASIC3.18□□□□□ -1.9
TPM4P67936 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM4P67936 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
TPM4P67936 RABEPKP1-201ENST00000440529 1026 ntBASIC3.18□□□□□ -1.9
TPM4P67936 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms