Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RPS18P6-201ENST00000476880 458 ntBASIC5.03□□□□□ -1.6
YBX1P67809 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 Y_RNA.718-201ENST00000517110 102 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.03□□□□□ -1.6
YBX1P67809 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.03□□□□□ -1.6
YBX1P67809 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.03□□□□□ -1.6
YBX1P67809 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.03□□□□□ -1.6
YBX1P67809 OR4T1P-201ENST00000554933 911 ntBASIC5.03□□□□□ -1.6
YBX1P67809 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.03□□□□□ -1.6
YBX1P67809 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.03□□□□□ -1.6
YBX1P67809 AL356432.3-201ENST00000568952 465 ntBASIC5.03□□□□□ -1.6
YBX1P67809 DPPA3P3-201ENST00000603842 430 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AL355472.4-201ENST00000610233 626 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AL713922.2-201ENST00000619384 716 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AL133216.2-202ENST00000634512 349 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AL672167.1-204ENST00000641875 3017 ntBASIC5.03□□□□□ -1.6
YBX1P67809 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 AC007823.1-201ENST00000569932 1566 ntBASIC5.03□□□□□ -1.6
YBX1P67809 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.03□□□□□ -1.6
YBX1P67809 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
YBX1P67809 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.02□□□□□ -1.61
YBX1P67809 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 ASNSP3-201ENST00000451989 1306 ntBASIC5.02□□□□□ -1.61
YBX1P67809 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 RNU6-249P-201ENST00000363016 102 ntBASIC5.02□□□□□ -1.61
YBX1P67809 Y_RNA.231-201ENST00000364358 102 ntBASIC5.02□□□□□ -1.61
YBX1P67809 RNY4P16-201ENST00000364768 94 ntBASIC5.02□□□□□ -1.61
YBX1P67809 MIR223-201ENST00000385204 110 ntBASIC5.02□□□□□ -1.61
YBX1P67809 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 AC008280.1-201ENST00000418851 412 ntBASIC5.02□□□□□ -1.61
YBX1P67809 AC048351.1-201ENST00000420064 602 ntBASIC5.02□□□□□ -1.61
YBX1P67809 HSPE1P1-201ENST00000421494 318 ntBASIC5.02□□□□□ -1.61
YBX1P67809 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 FABP7P2-201ENST00000429946 379 ntBASIC5.02□□□□□ -1.61
YBX1P67809 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 MTND3P16-201ENST00000452205 344 ntBASIC5.02□□□□□ -1.61
YBX1P67809 AC092647.2-201ENST00000452998 253 ntBASIC5.02□□□□□ -1.61
YBX1P67809 HMGB1P4-201ENST00000455362 567 ntBASIC5.02□□□□□ -1.61
YBX1P67809 AL356010.1-201ENST00000456364 102 ntBASIC5.02□□□□□ -1.61
YBX1P67809 MTND5P22-201ENST00000458380 195 ntBASIC5.02□□□□□ -1.61
YBX1P67809 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.02□□□□□ -1.61
YBX1P67809 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.02□□□□□ -1.61
YBX1P67809 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.02□□□□□ -1.61
YBX1P67809 RNU6-410P-201ENST00000517006 107 ntBASIC5.02□□□□□ -1.61
YBX1P67809 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.02□□□□□ -1.61
YBX1P67809 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.02□□□□□ -1.61
YBX1P67809 AC018552.1-201ENST00000562099 811 ntBASIC5.02□□□□□ -1.61
YBX1P67809 MIR3691-201ENST00000578066 90 ntBASIC5.02□□□□□ -1.61
YBX1P67809 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 AL627309.6-201ENST00000606857 840 ntBASIC5.02□□□□□ -1.61
YBX1P67809 AC019193.3-201ENST00000609144 554 ntBASIC5.02□□□□□ -1.61
YBX1P67809 MIR6820-201ENST00000611508 62 ntBASIC5.02□□□□□ -1.61
YBX1P67809 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
YBX1P67809 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.02□□□□□ -1.61
YBX1P67809 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
YBX1P67809 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.01□□□□□ -1.61
YBX1P67809 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.01□□□□□ -1.61
YBX1P67809 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
YBX1P67809 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.01□□□□□ -1.61
YBX1P67809 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 AC011155.1-201ENST00000316512 456 ntBASIC5.01□□□□□ -1.61
YBX1P67809 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 RNU6-1309P-201ENST00000363305 108 ntBASIC5.01□□□□□ -1.61
YBX1P67809 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 SNORA22B-201ENST00000383876 138 ntBASIC5.01□□□□□ -1.61
YBX1P67809 RNU1-106P-201ENST00000384382 164 ntBASIC5.01□□□□□ -1.61
YBX1P67809 MIR600-201ENST00000385007 98 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms