Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AL391261.4-201ENST00000616012 481 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.37□□□□□ -1.87
RPS4XP62701 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.37□□□□□ -1.87
RPS4XP62701 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 AC022509.4-201ENST00000621404 572 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 AC120349.2-201ENST00000625002 298 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.37□□□□□ -1.87
RPS4XP62701 OR6C71P-202ENST00000641886 1107 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
RPS4XP62701 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 AC109315.1-201ENST00000584143 1347 ntBASIC3.37□□□□□ -1.87
RPS4XP62701 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPS4XP62701 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.36□□□□□ -1.87
RPS4XP62701 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 AL353746.1-201ENST00000566293 6881 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 ZNF29P-201ENST00000225587 168 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 RNU6-989P-201ENST00000362756 107 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 RNU6-263P-201ENST00000363811 107 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 RNU4-68P-201ENST00000364314 141 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 RNU6-335P-201ENST00000364563 113 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 SNORD82-201ENST00000365530 70 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 SOD2P1-201ENST00000396543 562 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC016769.3-201ENST00000396562 315 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AL583834.1-201ENST00000406943 343 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.36□□□□□ -1.87
RPS4XP62701 AMD1P2-201ENST00000412936 992 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RPS4XP62701 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.36□□□□□ -1.87
RPS4XP62701 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.36□□□□□ -1.87
RPS4XP62701 AL139247.1-201ENST00000422768 325 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AL513174.1-201ENST00000423182 629 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC092648.1-201ENST00000425870 423 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 USP9YP31-201ENST00000431405 881 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.36□□□□□ -1.87
RPS4XP62701 MRPS18BP2-201ENST00000434310 759 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 NDUFB1P1-201ENST00000435191 180 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.36□□□□□ -1.87
RPS4XP62701 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.36□□□□□ -1.87
RPS4XP62701 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.36□□□□□ -1.87
RPS4XP62701 SETD6P1-201ENST00000444575 317 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 NPM1P49-201ENST00000448027 714 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AL009048.1-201ENST00000450437 298 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.36□□□□□ -1.87
RPS4XP62701 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.36□□□□□ -1.87
RPS4XP62701 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.36□□□□□ -1.87
RPS4XP62701 AC093853.1-201ENST00000515689 483 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.36□□□□□ -1.87
RPS4XP62701 AC026403.1-201ENST00000518938 295 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 DUXAP2-201ENST00000519198 589 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC022695.1-201ENST00000522089 237 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.36□□□□□ -1.87
RPS4XP62701 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.36□□□□□ -1.87
RPS4XP62701 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.36□□□□□ -1.87
RPS4XP62701 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 AP000619.3-201ENST00000535634 1127 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC005832.3-201ENST00000537929 631 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.36□□□□□ -1.87
RPS4XP62701 CBX3P5-201ENST00000552017 521 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.36□□□□□ -1.87
RPS4XP62701 HIGD1AP17-201ENST00000554576 276 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AL132857.1-201ENST00000555180 708 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.36□□□□□ -1.87
RPS4XP62701 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.36□□□□□ -1.87
RPS4XP62701 BNIP3P26-201ENST00000600827 554 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC124312.4-201ENST00000605533 310 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.36□□□□□ -1.87
RPS4XP62701 AC019176.2-201ENST00000611579 315 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AL713922.2-201ENST00000619384 716 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 AC012314.7-201ENST00000619693 93 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.36□□□□□ -1.87
RPS4XP62701 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.36□□□□□ -1.87
RPS4XP62701 CYP3A51P-201ENST00000633513 256 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.36□□□□□ -1.87
RPS4XP62701 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPS4XP62701 NUP58P1-201ENST00000502546 1738 ntBASIC3.36□□□□□ -1.87
RPS4XP62701 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
RPS4XP62701 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
RPS4XP62701 CDR1-202ENST00000625883 1485 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AP001486.2-201ENST00000561652 5113 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 MTCO1P23-201ENST00000415223 1526 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.35□□□□□ -1.87
RPS4XP62701 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RPS4XP62701 NACA3P-201ENST00000359690 648 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 SNORA31-201ENST00000362607 130 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms