Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM6P62312 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.72□□□□□ -1.97
LSM6P62312 AL606834.2-201ENST00000602954 668 ntBASIC2.72□□□□□ -1.97
LSM6P62312 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.72□□□□□ -1.97
LSM6P62312 AC018755.4-201ENST00000619715 454 ntBASIC2.72□□□□□ -1.97
LSM6P62312 LRRC77P-213ENST00000637727 880 ntBASIC2.72□□□□□ -1.97
LSM6P62312 AC010733.2-201ENST00000589496 5702 ntBASIC2.72□□□□□ -1.97
LSM6P62312 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LSM6P62312 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM6P62312 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM6P62312 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM6P62312 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.97
LSM6P62312 OR5BR1P-201ENST00000524992 1330 ntBASIC2.71□□□□□ -1.98
LSM6P62312 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM6P62312 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM6P62312 RNA5SP120-201ENST00000410900 112 ntBASIC2.71□□□□□ -1.98
LSM6P62312 BMS1P22-201ENST00000414726 313 ntBASIC2.71□□□□□ -1.98
LSM6P62312 RPL21P32-201ENST00000419877 477 ntBASIC2.71□□□□□ -1.98
LSM6P62312 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM6P62312 XKRYP6-201ENST00000440468 1116 ntBASIC2.71□□□□□ -1.98
LSM6P62312 XKRYP3-201ENST00000442113 1116 ntBASIC2.71□□□□□ -1.98
LSM6P62312 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM6P62312 FTH1P2-201ENST00000466086 412 ntBASIC2.71□□□□□ -1.98
LSM6P62312 HMGB1P25-201ENST00000468402 607 ntBASIC2.71□□□□□ -1.98
LSM6P62312 RN7SL807P-201ENST00000470923 297 ntBASIC2.71□□□□□ -1.98
LSM6P62312 AC025459.1-201ENST00000504072 156 ntBASIC2.71□□□□□ -1.98
LSM6P62312 AC004062.1-201ENST00000509926 645 ntBASIC2.71□□□□□ -1.98
LSM6P62312 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.71□□□□□ -1.98
LSM6P62312 AC133963.2-201ENST00000513686 578 ntBASIC2.71□□□□□ -1.98
LSM6P62312 HMGB1P23-201ENST00000518743 568 ntBASIC2.71□□□□□ -1.98
LSM6P62312 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.71□□□□□ -1.98
LSM6P62312 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM6P62312 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM6P62312 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM6P62312 AC005242.1-201ENST00000585658 438 ntBASIC2.71□□□□□ -1.98
LSM6P62312 PRELID3BP8-201ENST00000604148 295 ntBASIC2.71□□□□□ -1.98
LSM6P62312 AC100793.4-201ENST00000613683 429 ntBASIC2.71□□□□□ -1.98
LSM6P62312 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM6P62312 AC092650.2-201ENST00000619984 902 ntBASIC2.71□□□□□ -1.98
LSM6P62312 AP000676.4-201ENST00000624659 623 ntBASIC2.71□□□□□ -1.98
LSM6P62312 OR8B1P-202ENST00000641132 1178 ntBASIC2.71□□□□□ -1.98
LSM6P62312 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.71□□□□□ -1.98
LSM6P62312 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
LSM6P62312 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM6P62312 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM6P62312 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM6P62312 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LSM6P62312 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.7□□□□□ -1.98
LSM6P62312 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LSM6P62312 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.7□□□□□ -1.98
LSM6P62312 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LSM6P62312 SNORA63.1-201ENST00000362493 131 ntBASIC2.7□□□□□ -1.98
LSM6P62312 RN7SKP58-201ENST00000411010 305 ntBASIC2.7□□□□□ -1.98
LSM6P62312 RAD23BP2-201ENST00000416003 1207 ntBASIC2.7□□□□□ -1.98
LSM6P62312 HSFY1P1-201ENST00000423928 1178 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
LSM6P62312 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.7□□□□□ -1.98
LSM6P62312 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.7□□□□□ -1.98
LSM6P62312 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.7□□□□□ -1.98
LSM6P62312 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.7□□□□□ -1.98
LSM6P62312 AL591503.2-201ENST00000442314 1005 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC016696.1-201ENST00000446949 318 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.7□□□□□ -1.98
LSM6P62312 RPS4XP10-201ENST00000465034 731 ntBASIC2.7□□□□□ -1.98
LSM6P62312 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.7□□□□□ -1.98
LSM6P62312 RNF138P1-201ENST00000502765 546 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.7□□□□□ -1.98
LSM6P62312 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LSM6P62312 HSPD1P15-201ENST00000505573 1122 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC147055.1-201ENST00000509261 750 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.7□□□□□ -1.98
LSM6P62312 AC108043.1-201ENST00000512696 574 ntBASIC2.7□□□□□ -1.98
LSM6P62312 RNU6-56P-201ENST00000516986 93 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC104986.1-201ENST00000517978 436 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AP003385.6-201ENST00000531603 374 ntBASIC2.7□□□□□ -1.98
LSM6P62312 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
LSM6P62312 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.7□□□□□ -1.98
LSM6P62312 MTCYBP28-201ENST00000566728 1132 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC096947.1-201ENST00000603233 470 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC131902.3-201ENST00000611767 581 ntBASIC2.7□□□□□ -1.98
LSM6P62312 AC084757.4-201ENST00000616350 526 ntBASIC2.7□□□□□ -1.98
LSM6P62312 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.7□□□□□ -1.98
LSM6P62312 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LSM6P62312 AL359893.1-201ENST00000447628 1580 ntBASIC2.7□□□□□ -1.98
LSM6P62312 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LSM6P62312 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.69□□□□□ -1.98
LSM6P62312 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LSM6P62312 AL035425.3-201ENST00000564206 4996 ntBASIC2.69□□□□□ -1.98
LSM6P62312 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LSM6P62312 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LSM6P62312 METTL21EP-201ENST00000298105 713 ntBASIC2.69□□□□□ -1.98
LSM6P62312 SNORA71.3-201ENST00000362582 128 ntBASIC2.69□□□□□ -1.98
LSM6P62312 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.69□□□□□ -1.98
LSM6P62312 SAR1AP4-201ENST00000429225 591 ntBASIC2.69□□□□□ -1.98
LSM6P62312 YME1L1P1-201ENST00000429435 297 ntBASIC2.69□□□□□ -1.98
LSM6P62312 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.69□□□□□ -1.98
LSM6P62312 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.69□□□□□ -1.98
LSM6P62312 AC091862.1-201ENST00000438016 1100 ntBASIC2.69□□□□□ -1.98
LSM6P62312 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.69□□□□□ -1.98
LSM6P62312 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms