Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH12P55289 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 FNDC3CP-201ENST00000420795 1155 ntBASIC3.94□□□□□ -1.78
CDH12P55289 OFD1P18Y-201ENST00000420889 959 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 AL138785.1-201ENST00000425821 331 ntBASIC3.94□□□□□ -1.78
CDH12P55289 RSU1P2-202ENST00000437884 485 ntBASIC3.94□□□□□ -1.78
CDH12P55289 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.94□□□□□ -1.78
CDH12P55289 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH12P55289 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH12P55289 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC002381.1-201ENST00000447049 280 ntBASIC3.94□□□□□ -1.78
CDH12P55289 MTND1P27-201ENST00000451117 902 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.94□□□□□ -1.78
CDH12P55289 BTF3P5-201ENST00000457252 467 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 FAM172BP-201ENST00000487497 1089 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC106872.3-201ENST00000495104 446 ntBASIC3.94□□□□□ -1.78
CDH12P55289 RNF138P1-201ENST00000502765 546 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC093767.1-201ENST00000504523 156 ntBASIC3.94□□□□□ -1.78
CDH12P55289 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH12P55289 AF131216.2-201ENST00000512316 564 ntBASIC3.94□□□□□ -1.78
CDH12P55289 RNU6-405P-201ENST00000516637 110 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH12P55289 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH12P55289 AL109766.1-201ENST00000555080 552 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH12P55289 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH12P55289 AC051619.2-201ENST00000559063 397 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH12P55289 MIR5697-201ENST00000578045 78 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AL354984.3-201ENST00000604803 325 ntBASIC3.94□□□□□ -1.78
CDH12P55289 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH12P55289 AL159169.3-201ENST00000608871 561 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC100827.5-201ENST00000615883 426 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC006338.2-201ENST00000616864 791 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AC104010.1-201ENST00000616889 150 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AL445264.1-201ENST00000621719 171 ntBASIC3.94□□□□□ -1.78
CDH12P55289 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
CDH12P55289 AL603839.4-201ENST00000624658 1005 ntBASIC3.94□□□□□ -1.78
CDH12P55289 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH12P55289 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH12P55289 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH12P55289 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH12P55289 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH12P55289 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH12P55289 SAGE2P-201ENST00000420011 2126 ntBASIC3.94□□□□□ -1.78
CDH12P55289 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH12P55289 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH12P55289 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CDH12P55289 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 OR5P1P-201ENST00000299512 925 ntBASIC3.93□□□□□ -1.78
CDH12P55289 OR11H4-201ENST00000315409 1082 ntBASIC3.93□□□□□ -1.78
CDH12P55289 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CDH12P55289 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 Y_RNA.3-201ENST00000362331 103 ntBASIC3.93□□□□□ -1.78
CDH12P55289 Y_RNA.41-201ENST00000362646 102 ntBASIC3.93□□□□□ -1.78
CDH12P55289 RNVU1-6-201ENST00000364688 164 ntBASIC3.93□□□□□ -1.78
CDH12P55289 RNU6-769P-201ENST00000384407 104 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AL031679.1-201ENST00000400616 525 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AL133270.1-201ENST00000402635 279 ntBASIC3.93□□□□□ -1.78
CDH12P55289 RPS16P5-201ENST00000406501 404 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AF274854.1-201ENST00000413236 615 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC004987.3-201ENST00000413879 771 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH12P55289 RPL21P32-201ENST00000419877 477 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC069213.2-201ENST00000420238 366 ntBASIC3.93□□□□□ -1.78
CDH12P55289 COX6CP17-201ENST00000421389 185 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH12P55289 RPS3AP44-201ENST00000425466 790 ntBASIC3.93□□□□□ -1.78
CDH12P55289 NPM1P34-201ENST00000428821 893 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AL132765.1-201ENST00000434165 553 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH12P55289 AL022238.1-201ENST00000442557 355 ntBASIC3.93□□□□□ -1.78
CDH12P55289 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH12P55289 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH12P55289 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH12P55289 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.93□□□□□ -1.78
CDH12P55289 MTCYBP1-201ENST00000454315 1119 ntBASIC3.93□□□□□ -1.78
CDH12P55289 OR6K1P-201ENST00000456766 971 ntBASIC3.93□□□□□ -1.78
CDH12P55289 RPL37P6-202ENST00000464216 403 ntBASIC3.93□□□□□ -1.78
CDH12P55289 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH12P55289 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms