Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PCBP2P3-201ENST00000509726 843 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC010486.1-201ENST00000511793 424 ntBASIC3.75□□□□□ -1.81
VCPP55072 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.75□□□□□ -1.81
VCPP55072 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.75□□□□□ -1.81
VCPP55072 RN7SKP244-201ENST00000516513 307 ntBASIC3.75□□□□□ -1.81
VCPP55072 RNU6-579P-201ENST00000516879 102 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC027309.2-201ENST00000520566 192 ntBASIC3.75□□□□□ -1.81
VCPP55072 AP006245.1-201ENST00000522549 120 ntBASIC3.75□□□□□ -1.81
VCPP55072 HMGB1P1-201ENST00000522557 636 ntBASIC3.75□□□□□ -1.81
VCPP55072 OR4R3P-201ENST00000525084 838 ntBASIC3.75□□□□□ -1.81
VCPP55072 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.75□□□□□ -1.81
VCPP55072 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.75□□□□□ -1.81
VCPP55072 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VCPP55072 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VCPP55072 AC090666.1-201ENST00000578241 445 ntBASIC3.75□□□□□ -1.81
VCPP55072 BNIP3P4-201ENST00000604946 565 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC018645.2-201ENST00000609151 472 ntBASIC3.75□□□□□ -1.81
VCPP55072 RNVU1-4-201ENST00000612985 164 ntBASIC3.75□□□□□ -1.81
VCPP55072 AL450472.3-201ENST00000615578 367 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC018926.3-201ENST00000618841 406 ntBASIC3.75□□□□□ -1.81
VCPP55072 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.75□□□□□ -1.81
VCPP55072 AC006927.2-201ENST00000639256 389 ntBASIC3.75□□□□□ -1.81
VCPP55072 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VCPP55072 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VCPP55072 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VCPP55072 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VCPP55072 MTCO1P6-201ENST00000481192 1384 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC007656.2-201ENST00000624902 4547 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VCPP55072 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VCPP55072 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VCPP55072 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
VCPP55072 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VCPP55072 RNU4-35P-201ENST00000362588 141 ntBASIC3.74□□□□□ -1.81
VCPP55072 SNORA7.2-201ENST00000364446 145 ntBASIC3.74□□□□□ -1.81
VCPP55072 RNA5SP235-201ENST00000365411 114 ntBASIC3.74□□□□□ -1.81
VCPP55072 ARF4P3-201ENST00000397387 509 ntBASIC3.74□□□□□ -1.81
VCPP55072 AL136116.1-201ENST00000403591 381 ntBASIC3.74□□□□□ -1.81
VCPP55072 AP000567.1-201ENST00000406413 156 ntBASIC3.74□□□□□ -1.81
VCPP55072 AL355143.1-201ENST00000407101 841 ntBASIC3.74□□□□□ -1.81
VCPP55072 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.74□□□□□ -1.81
VCPP55072 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.74□□□□□ -1.81
VCPP55072 UBE2V1P9-201ENST00000414760 368 ntBASIC3.74□□□□□ -1.81
VCPP55072 MTCYBP31-201ENST00000438855 1122 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC000041.1-201ENST00000439655 175 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC004865.1-201ENST00000442276 1003 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC010655.1-201ENST00000449336 292 ntBASIC3.74□□□□□ -1.81
VCPP55072 OR51B8P-201ENST00000449892 769 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC008280.2-201ENST00000455473 307 ntBASIC3.74□□□□□ -1.81
VCPP55072 AP001992.1-205ENST00000462248 379 ntBASIC3.74□□□□□ -1.81
VCPP55072 S100A11P2-201ENST00000467589 312 ntBASIC3.74□□□□□ -1.81
VCPP55072 RN7SL330P-201ENST00000469709 307 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC084357.1-201ENST00000473404 255 ntBASIC3.74□□□□□ -1.81
VCPP55072 ACTG1P13-201ENST00000486987 1043 ntBASIC3.74□□□□□ -1.81
VCPP55072 FCF1P3-201ENST00000496394 590 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.74□□□□□ -1.81
VCPP55072 PRELID3BP4-201ENST00000515476 571 ntBASIC3.74□□□□□ -1.81
VCPP55072 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.74□□□□□ -1.81
VCPP55072 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.74□□□□□ -1.81
VCPP55072 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VCPP55072 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.74□□□□□ -1.81
VCPP55072 AC023825.1-201ENST00000566704 1030 ntBASIC3.74□□□□□ -1.81
VCPP55072 MIR4504-201ENST00000577413 92 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.74□□□□□ -1.81
VCPP55072 AC008507.2-201ENST00000588402 1176 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.74□□□□□ -1.81
VCPP55072 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.74□□□□□ -1.81
VCPP55072 AL592295.2-201ENST00000612578 206 ntBASIC3.74□□□□□ -1.81
VCPP55072 AL162274.2-201ENST00000614406 332 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC007275.1-201ENST00000621243 671 ntBASIC3.74□□□□□ -1.81
VCPP55072 AP003476.1-201ENST00000623984 516 ntBASIC3.74□□□□□ -1.81
VCPP55072 AC010872.1-201ENST00000624225 675 ntBASIC3.74□□□□□ -1.81
VCPP55072 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
VCPP55072 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
VCPP55072 AC058791.1-201ENST00000608412 3198 ntBASIC3.73□□□□□ -1.81
VCPP55072 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCPP55072 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VCPP55072 RNU5B-4P-201ENST00000363508 111 ntBASIC3.73□□□□□ -1.81
VCPP55072 SNORA51.12-201ENST00000384448 134 ntBASIC3.73□□□□□ -1.81
VCPP55072 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.73□□□□□ -1.81
VCPP55072 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.73□□□□□ -1.81
VCPP55072 RPL31P2-201ENST00000413849 377 ntBASIC3.73□□□□□ -1.81
VCPP55072 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.73□□□□□ -1.81
VCPP55072 AL049610.1-201ENST00000423374 372 ntBASIC3.73□□□□□ -1.81
VCPP55072 SDCBPP2-201ENST00000424643 885 ntBASIC3.73□□□□□ -1.81
VCPP55072 MRPS18BP2-201ENST00000434310 759 ntBASIC3.73□□□□□ -1.81
VCPP55072 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.73□□□□□ -1.81
VCPP55072 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.73□□□□□ -1.81
VCPP55072 AL662791.1-201ENST00000441992 928 ntBASIC3.73□□□□□ -1.81
VCPP55072 AL929288.2-201ENST00000446368 407 ntBASIC3.73□□□□□ -1.81
VCPP55072 RPL23AP14-201ENST00000468281 468 ntBASIC3.73□□□□□ -1.81
VCPP55072 AC093801.2-201ENST00000503966 1050 ntBASIC3.73□□□□□ -1.81
VCPP55072 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VCPP55072 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.73□□□□□ -1.81
VCPP55072 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.73□□□□□ -1.81
VCPP55072 MTCYBP41-201ENST00000528913 1123 ntBASIC3.73□□□□□ -1.81
VCPP55072 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.73□□□□□ -1.81
VCPP55072 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.73□□□□□ -1.81
VCPP55072 CYB5AP5-201ENST00000549779 389 ntBASIC3.73□□□□□ -1.81
VCPP55072 AC010735.1-201ENST00000567305 1026 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms