Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL12P48061 ZNF92P2-201ENST00000600543 1059 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 AL671309.1-201ENST00000603750 544 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL12P48061 AP001148.1-201ENST00000624124 2359 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
CXCL12P48061 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.01□□□□□ -1.93
CXCL12P48061 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL12P48061 AF127577.6-201ENST00000623352 2191 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL12P48061 SEPT7P7-201ENST00000420492 1301 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 METTL21EP-201ENST00000298105 713 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 RNU6-650P-201ENST00000365658 111 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AL031679.1-201ENST00000400616 525 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 MTATP6P31-201ENST00000406985 692 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 MIR1261-201ENST00000408659 82 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AC069218.2-201ENST00000411665 344 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 PNRC2P1-201ENST00000423940 420 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.01□□□□□ -1.93
CXCL12P48061 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 ELOCP11-201ENST00000436690 332 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 HMGB3P11-201ENST00000440127 604 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 RNFT1P2-201ENST00000443064 757 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 ELOCP16-201ENST00000444494 332 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL12P48061 SNRPGP3-201ENST00000469405 227 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL12P48061 AC133963.2-201ENST00000513686 578 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 SNORA76.2-201ENST00000517095 137 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL12P48061 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL12P48061 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL12P48061 HIGD1AP10-201ENST00000527837 282 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AP003168.1-201ENST00000530091 307 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL12P48061 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 AC006254.3-201ENST00000603353 884 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AC079610.2-201ENST00000604818 690 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AC010680.4-201ENST00000605334 543 ntBASIC3.01□□□□□ -1.93
CXCL12P48061 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL12P48061 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CXCL12P48061 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL12P48061 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL12P48061 AL118496.1-201ENST00000440201 1812 ntBASIC3□□□□□ -1.93
CXCL12P48061 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3□□□□□ -1.93
CXCL12P48061 DCAF13P3-201ENST00000561147 1334 ntBASIC3□□□□□ -1.93
CXCL12P48061 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL12P48061 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL12P48061 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
CXCL12P48061 SNORA18.3-201ENST00000384122 132 ntBASIC3□□□□□ -1.93
CXCL12P48061 MIR196B-201ENST00000384852 84 ntBASIC3□□□□□ -1.93
CXCL12P48061 ATF1P1-201ENST00000406040 927 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC007390.1-201ENST00000415722 356 ntBASIC3□□□□□ -1.93
CXCL12P48061 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3□□□□□ -1.93
CXCL12P48061 AL049610.1-201ENST00000423374 372 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC005189.1-201ENST00000431286 310 ntBASIC3□□□□□ -1.93
CXCL12P48061 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL12P48061 AC009263.1-201ENST00000441193 1239 ntBASIC3□□□□□ -1.93
CXCL12P48061 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3□□□□□ -1.93
CXCL12P48061 BX276092.4-201ENST00000452056 248 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3□□□□□ -1.93
CXCL12P48061 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3□□□□□ -1.93
CXCL12P48061 AP000893.1-201ENST00000474462 794 ntBASIC3□□□□□ -1.93
CXCL12P48061 RPL30P11-201ENST00000495304 339 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC023050.1-201ENST00000498198 304 ntBASIC3□□□□□ -1.93
CXCL12P48061 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3□□□□□ -1.93
CXCL12P48061 MTCO1P30-201ENST00000515244 580 ntBASIC3□□□□□ -1.93
CXCL12P48061 COX6B1P6-201ENST00000522347 255 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3□□□□□ -1.93
CXCL12P48061 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3□□□□□ -1.93
CXCL12P48061 TGIF1P1-201ENST00000558095 802 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3□□□□□ -1.93
CXCL12P48061 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3□□□□□ -1.93
CXCL12P48061 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3□□□□□ -1.93
CXCL12P48061 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3□□□□□ -1.93
CXCL12P48061 NF1P5-201ENST00000588287 448 ntBASIC3□□□□□ -1.93
CXCL12P48061 PCNAP1-202ENST00000595299 752 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3□□□□□ -1.93
CXCL12P48061 AC069304.3-201ENST00000603938 1084 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC026790.2-201ENST00000606282 430 ntBASIC3□□□□□ -1.93
CXCL12P48061 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL12P48061 AL445493.3-201ENST00000619568 477 ntBASIC3□□□□□ -1.93
CXCL12P48061 AC020923.1-201ENST00000624021 917 ntBASIC3□□□□□ -1.93
CXCL12P48061 U6.107-201ENST00000637108 79 ntBASIC3□□□□□ -1.93
CXCL12P48061 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL12P48061 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CXCL12P48061 MTND5P11-201ENST00000511037 1812 ntBASIC3□□□□□ -1.93
CXCL12P48061 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL12P48061 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3□□□□□ -1.93
CXCL12P48061 AC104446.1-201ENST00000613728 1321 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL12P48061 AL672167.1-206ENST00000356293 943 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 RNU6-792P-201ENST00000363490 107 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 MTCO3P31-201ENST00000405526 789 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms