Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CHRNA4P43681 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA4P43681 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CHRNA4P43681 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA4P43681 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA4P43681 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA4P43681 Y_RNA.416-201ENST00000384014 113 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 RPL21P24-201ENST00000413752 448 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA4P43681 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AL451139.1-201ENST00000434718 346 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 AC099670.2-201ENST00000435130 321 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA4P43681 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AL353752.1-201ENST00000454946 260 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 RNU7-182P-201ENST00000459009 62 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 RPS15AP17-201ENST00000470598 390 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 AP001025.2-201ENST00000490908 477 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AC009901.1-201ENST00000506703 541 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 Y_RNA.670-201ENST00000516255 105 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 MTND4P7-201ENST00000523876 130 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA4P43681 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.66□□□□□ -1.5
CHRNA4P43681 HSBP1P1-201ENST00000555205 166 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA4P43681 AC084783.1-201ENST00000565846 910 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 MIR4311-201ENST00000580794 100 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 MIR548Y-201ENST00000582739 110 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.66□□□□□ -1.5
CHRNA4P43681 MIR4420-201ENST00000583944 77 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AC012433.1-201ENST00000588916 398 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AC004832.4-201ENST00000608952 331 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 AL355365.1-201ENST00000616480 294 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA4P43681 AC003973.3-201ENST00000624863 2822 ntBASIC5.66□□□□□ -1.5
CHRNA4P43681 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA4P43681 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA4P43681 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA4P43681 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA4P43681 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA4P43681 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA4P43681 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA4P43681 Y_RNA.22-201ENST00000362492 102 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 RNU6-82P-201ENST00000363970 107 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 Y_RNA.214-201ENST00000364201 112 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 RNA5SP131-201ENST00000365452 119 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA4P43681 RNU6-48P-201ENST00000384161 107 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 MIR548H3-201ENST00000408771 118 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 AC108032.1-201ENST00000416706 207 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AL133396.1-201ENST00000432048 687 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 EEF1B2P6-201ENST00000445713 673 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 RPL36AP39-201ENST00000445859 318 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA4P43681 PPIAP20-201ENST00000449839 135 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AC022493.2-201ENST00000506122 481 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA4P43681 IGKV2-19-201ENST00000518132 283 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA4P43681 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA4P43681 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA4P43681 AL121992.2-201ENST00000606262 256 ntBASIC5.65□□□□□ -1.5
CHRNA4P43681 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA4P43681 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA4P43681 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.65□□□□□ -1.51
CHRNA4P43681 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA4P43681 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.65□□□□□ -1.51
CHRNA4P43681 OR4F13P-202ENST00000560066 2054 ntBASIC5.65□□□□□ -1.51
CHRNA4P43681 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA4P43681 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA4P43681 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.65□□□□□ -1.51
CHRNA4P43681 AC116158.1-201ENST00000560231 2129 ntBASIC5.65□□□□□ -1.51
CHRNA4P43681 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.65□□□□□ -1.51
CHRNA4P43681 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CHRNA4P43681 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA4P43681 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA4P43681 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
CHRNA4P43681 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.64□□□□□ -1.51
CHRNA4P43681 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms