Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL353705.4-201ENST00000449661 238 ntBASIC3.27□□□□□ -1.89
COL18A1P39060 OR6C72P-201ENST00000451403 892 ntBASIC3.27□□□□□ -1.89
COL18A1P39060 MTCYBP14-201ENST00000457471 715 ntBASIC3.27□□□□□ -1.89
COL18A1P39060 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
COL18A1P39060 HAUS1P1-201ENST00000505275 832 ntBASIC3.27□□□□□ -1.89
COL18A1P39060 SNORD116-30-201ENST00000516468 85 ntBASIC3.27□□□□□ -1.89
COL18A1P39060 Z99129.2-201ENST00000619967 314 ntBASIC3.27□□□□□ -1.89
COL18A1P39060 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
COL18A1P39060 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL18A1P39060 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL18A1P39060 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COL18A1P39060 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
COL18A1P39060 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL18A1P39060 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL18A1P39060 AL590004.2-201ENST00000404787 371 ntBASIC3.26□□□□□ -1.89
COL18A1P39060 AC073136.2-201ENST00000417282 849 ntBASIC3.26□□□□□ -1.89
COL18A1P39060 AL356806.1-201ENST00000422524 916 ntBASIC3.26□□□□□ -1.89
COL18A1P39060 MTND4LP13-201ENST00000425022 298 ntBASIC3.26□□□□□ -1.89
COL18A1P39060 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.26□□□□□ -1.89
COL18A1P39060 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.26□□□□□ -1.89
COL18A1P39060 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.26□□□□□ -1.89
COL18A1P39060 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL18A1P39060 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL18A1P39060 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL18A1P39060 Z73965.1-201ENST00000623412 2297 ntBASIC3.26□□□□□ -1.89
COL18A1P39060 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL18A1P39060 SNORD114-1-201ENST00000362705 72 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 RPS3AP26-201ENST00000398259 784 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AC007064.1-201ENST00000412238 351 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 RPL23AP74-201ENST00000437246 471 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.25□□□□□ -1.89
COL18A1P39060 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 RPL21P99-201ENST00000480369 423 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.25□□□□□ -1.89
COL18A1P39060 AC010615.3-201ENST00000597319 394 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AC010680.4-201ENST00000605334 543 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL18A1P39060 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL18A1P39060 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL18A1P39060 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
COL18A1P39060 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL18A1P39060 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.25□□□□□ -1.89
COL18A1P39060 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL18A1P39060 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL18A1P39060 RNU4-7P-201ENST00000364758 141 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AL024474.1-201ENST00000404655 591 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.25□□□□□ -1.89
COL18A1P39060 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.25□□□□□ -1.89
COL18A1P39060 Z99127.2-201ENST00000441426 334 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.25□□□□□ -1.89
COL18A1P39060 RPL23AP45-201ENST00000476406 468 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AC126182.1-201ENST00000478134 357 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.25□□□□□ -1.89
COL18A1P39060 KCTD9P5-201ENST00000504141 1170 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL18A1P39060 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.25□□□□□ -1.89
COL18A1P39060 CKS1BP1-201ENST00000555221 240 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 RPL23AP84-201ENST00000571193 464 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 AL162233.1-201ENST00000620014 944 ntBASIC3.25□□□□□ -1.89
COL18A1P39060 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.25□□□□□ -1.89
COL18A1P39060 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.25□□□□□ -1.89
COL18A1P39060 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
COL18A1P39060 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
COL18A1P39060 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL18A1P39060 HSPD1P16-201ENST00000402302 394 ntBASIC3.24□□□□□ -1.89
COL18A1P39060 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.24□□□□□ -1.89
COL18A1P39060 AC093084.1-201ENST00000424233 687 ntBASIC3.24□□□□□ -1.89
COL18A1P39060 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.24□□□□□ -1.89
COL18A1P39060 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.24□□□□□ -1.89
COL18A1P39060 AC096638.1-201ENST00000444678 216 ntBASIC3.24□□□□□ -1.89
COL18A1P39060 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.24□□□□□ -1.89
COL18A1P39060 RNA5SP458-201ENST00000516188 119 ntBASIC3.24□□□□□ -1.89
COL18A1P39060 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.24□□□□□ -1.89
COL18A1P39060 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.24□□□□□ -1.89
COL18A1P39060 FAM106CP-201ENST00000582212 507 ntBASIC3.24□□□□□ -1.89
COL18A1P39060 AL445437.1-201ENST00000623157 3087 ntBASIC3.24□□□□□ -1.89
COL18A1P39060 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL18A1P39060 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL18A1P39060 XPOTP1-201ENST00000443317 2398 ntBASIC3.24□□□□□ -1.89
COL18A1P39060 RPL21P132-201ENST00000331267 462 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 RPL23AP48-201ENST00000406913 488 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 AL031736.2-201ENST00000426573 787 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 ISCA1P6-201ENST00000427740 390 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.23□□□□□ -1.89
COL18A1P39060 AC243772.1-201ENST00000451620 410 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 RN7SL297P-201ENST00000483161 293 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 AC021146.5-201ENST00000503544 545 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.23□□□□□ -1.89
COL18A1P39060 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL18A1P39060 AL592494.3-201ENST00000609485 464 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 AL133370.2-201ENST00000619934 439 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL18A1P39060 BX005019.1-201ENST00000561881 1810 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.23□□□□□ -1.89
COL18A1P39060 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.23□□□□□ -1.89
COL18A1P39060 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.23□□□□□ -1.89
COL18A1P39060 RPL9P7-201ENST00000330965 580 ntBASIC3.23□□□□□ -1.89
COL18A1P39060 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms