Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-84P-201ENST00000607737 102 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP1P30622 MIR1291-201ENST00000627649 87 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP1P30622 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLIP1P30622 BX005019.1-201ENST00000561881 1810 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP1P30622 SNORA62.2-201ENST00000364672 152 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLIP1P30622 SEPT7P2-202ENST00000398921 823 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 Z98742.3-201ENST00000418637 326 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 AC233981.1-201ENST00000423224 461 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 MTCO2P17-201ENST00000424336 677 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.87□□□□□ -1.79
CLIP1P30622 AL139415.2-201ENST00000431968 163 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 AP000873.5-201ENST00000533906 236 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP1P30622 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP1P30622 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.86□□□□□ -1.79
CLIP1P30622 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP1P30622 AL158825.1-201ENST00000414735 521 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 TOMM20P4-201ENST00000427861 435 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 NDUFS5P3-201ENST00000450668 321 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP1P30622 AC108471.1-201ENST00000513977 287 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP1P30622 ELOCP31-201ENST00000540463 467 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 BDH2P1-201ENST00000602288 736 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 SNORA35B-201ENST00000607417 129 ntBASIC3.86□□□□□ -1.79
CLIP1P30622 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.86□□□□□ -1.79
CLIP1P30622 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP1P30622 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CLIP1P30622 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.85□□□□□ -1.79
CLIP1P30622 Z73965.1-201ENST00000623412 2297 ntBASIC3.85□□□□□ -1.79
CLIP1P30622 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP1P30622 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP1P30622 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
CLIP1P30622 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.85□□□□□ -1.79
CLIP1P30622 AC098826.3-201ENST00000603823 466 ntBASIC3.85□□□□□ -1.79
CLIP1P30622 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP1P30622 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLIP1P30622 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLIP1P30622 MIR142-201ENST00000384835 87 ntBASIC3.84□□□□□ -1.79
CLIP1P30622 BTF3P7-201ENST00000407097 488 ntBASIC3.84□□□□□ -1.79
CLIP1P30622 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP1P30622 AC005921.1-201ENST00000510589 286 ntBASIC3.84□□□□□ -1.79
CLIP1P30622 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP1P30622 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP1P30622 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CLIP1P30622 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.84□□□□□ -1.79
CLIP1P30622 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.84□□□□□ -1.79
CLIP1P30622 AC023043.3-201ENST00000593113 385 ntBASIC3.84□□□□□ -1.79
CLIP1P30622 AL158827.2-201ENST00000602494 330 ntBASIC3.84□□□□□ -1.79
CLIP1P30622 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP1P30622 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
CLIP1P30622 AL691447.3-201ENST00000635020 330 ntBASIC3.84□□□□□ -1.79
CLIP1P30622 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLIP1P30622 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CLIP1P30622 AC092881.1-201ENST00000638218 2733 ntBASIC3.83□□□□□ -1.8
CLIP1P30622 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.83□□□□□ -1.8
CLIP1P30622 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP1P30622 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.83□□□□□ -1.8
CLIP1P30622 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLIP1P30622 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
CLIP1P30622 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.83□□□□□ -1.8
CLIP1P30622 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.83□□□□□ -1.8
CLIP1P30622 MIR4648-201ENST00000580107 72 ntBASIC3.83□□□□□ -1.8
CLIP1P30622 AC067747.1-201ENST00000608026 250 ntBASIC3.83□□□□□ -1.8
CLIP1P30622 AC046143.2-201ENST00000609789 160 ntBASIC3.83□□□□□ -1.8
CLIP1P30622 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLIP1P30622 AC009159.1-201ENST00000618386 642 ntBASIC3.83□□□□□ -1.8
CLIP1P30622 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLIP1P30622 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLIP1P30622 AP006437.1-201ENST00000641440 3685 ntBASIC3.82□□□□□ -1.8
CLIP1P30622 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLIP1P30622 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLIP1P30622 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.82□□□□□ -1.8
CLIP1P30622 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.82□□□□□ -1.8
CLIP1P30622 MIR1273D-201ENST00000577266 86 ntBASIC3.82□□□□□ -1.8
CLIP1P30622 MIR4524B-201ENST00000581569 115 ntBASIC3.82□□□□□ -1.8
CLIP1P30622 MIR4769-201ENST00000584126 77 ntBASIC3.82□□□□□ -1.8
CLIP1P30622 AP002967.1-201ENST00000624203 539 ntBASIC3.82□□□□□ -1.8
CLIP1P30622 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.82□□□□□ -1.8
CLIP1P30622 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP1P30622 AL606537.1-201ENST00000607258 2011 ntBASIC3.81□□□□□ -1.8
CLIP1P30622 RNU1-73P-201ENST00000383971 164 ntBASIC3.81□□□□□ -1.8
CLIP1P30622 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLIP1P30622 RNA5SP239-201ENST00000410218 129 ntBASIC3.81□□□□□ -1.8
CLIP1P30622 AC104389.3-201ENST00000445629 235 ntBASIC3.81□□□□□ -1.8
CLIP1P30622 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.81□□□□□ -1.8
CLIP1P30622 LINC00888-204ENST00000487386 421 ntBASIC3.81□□□□□ -1.8
CLIP1P30622 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.81□□□□□ -1.8
CLIP1P30622 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP1P30622 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.81□□□□□ -1.8
CLIP1P30622 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLIP1P30622 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP1P30622 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms