Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PTPRMP28827 CACYBPP2-201ENST00000453625 678 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 AP004217.1-201ENST00000480579 346 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 OR5BN1P-201ENST00000532955 829 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 AC011492.1-201ENST00000600023 315 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 AC078899.5-201ENST00000612475 178 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PTPRMP28827 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPRMP28827 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PTPRMP28827 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPRMP28827 AC011460.1-201ENST00000636268 1834 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.73□□□□□ -1.81
PTPRMP28827 VDAC1P3-201ENST00000434069 851 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPRMP28827 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPRMP28827 OR5AK3P-201ENST00000527486 1297 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 ISCA1P3-201ENST00000577104 373 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 AC110741.2-201ENST00000605278 268 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 snoU13.31-201ENST00000607291 104 ntBASIC3.73□□□□□ -1.81
PTPRMP28827 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPRMP28827 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PTPRMP28827 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPRMP28827 Y_RNA.116-201ENST00000363292 103 ntBASIC3.72□□□□□ -1.81
PTPRMP28827 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPRMP28827 SNORA70E-201ENST00000384492 135 ntBASIC3.72□□□□□ -1.81
PTPRMP28827 MIR499A-201ENST00000384903 122 ntBASIC3.72□□□□□ -1.81
PTPRMP28827 MIR518E-201ENST00000385252 88 ntBASIC3.72□□□□□ -1.81
PTPRMP28827 GSTA9P-201ENST00000406231 611 ntBASIC3.72□□□□□ -1.81
PTPRMP28827 RNU6-321P-201ENST00000410912 106 ntBASIC3.72□□□□□ -1.81
PTPRMP28827 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PTPRMP28827 AC107222.1-201ENST00000510899 637 ntBASIC3.72□□□□□ -1.81
PTPRMP28827 AC005046.1-201ENST00000608515 625 ntBASIC3.72□□□□□ -1.81
PTPRMP28827 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.71□□□□□ -1.82
PTPRMP28827 OR11H5P-202ENST00000641612 1325 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 RNU1-87P-201ENST00000363727 170 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 Y_RNA.540-201ENST00000384638 111 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 MIR708-201ENST00000390708 88 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPRMP28827 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTPRMP28827 TRIM60P18-201ENST00000441518 828 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 HMGB3P8-201ENST00000449709 577 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
PTPRMP28827 RNA5SP281-201ENST00000516504 135 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 CKS1BP1-201ENST00000555221 240 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 MIR4635-201ENST00000583759 79 ntBASIC3.71□□□□□ -1.82
PTPRMP28827 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PTPRMP28827 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPRMP28827 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPRMP28827 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.7□□□□□ -1.82
PTPRMP28827 RNU1-17P-201ENST00000363022 152 ntBASIC3.7□□□□□ -1.82
PTPRMP28827 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.7□□□□□ -1.82
PTPRMP28827 NIPA2P2-201ENST00000496376 1083 ntBASIC3.7□□□□□ -1.82
PTPRMP28827 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.7□□□□□ -1.82
PTPRMP28827 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPRMP28827 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.7□□□□□ -1.82
PTPRMP28827 AL020991.1-201ENST00000612314 373 ntBASIC3.7□□□□□ -1.82
PTPRMP28827 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PTPRMP28827 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPRMP28827 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPRMP28827 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPRMP28827 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.69□□□□□ -1.82
PTPRMP28827 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPRMP28827 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PTPRMP28827 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTPRMP28827 MIR148B-201ENST00000362252 99 ntBASIC3.69□□□□□ -1.82
PTPRMP28827 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.69□□□□□ -1.82
PTPRMP28827 AL353729.1-201ENST00000425044 720 ntBASIC3.69□□□□□ -1.82
PTPRMP28827 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.69□□□□□ -1.82
PTPRMP28827 AC119751.1-201ENST00000513357 765 ntBASIC3.69□□□□□ -1.82
PTPRMP28827 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PTPRMP28827 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPRMP28827 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPRMP28827 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTPRMP28827 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPRMP28827 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPRMP28827 U8.13-201ENST00000390842 128 ntBASIC3.68□□□□□ -1.82
PTPRMP28827 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPRMP28827 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.68□□□□□ -1.82
PTPRMP28827 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPRMP28827 DYNLL1P6-201ENST00000503440 264 ntBASIC3.68□□□□□ -1.82
PTPRMP28827 PRELID3BP7-201ENST00000503606 469 ntBASIC3.68□□□□□ -1.82
PTPRMP28827 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPRMP28827 TXNP6-201ENST00000510190 310 ntBASIC3.68□□□□□ -1.82
PTPRMP28827 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.68□□□□□ -1.82
PTPRMP28827 AC122134.1-201ENST00000565664 1104 ntBASIC3.68□□□□□ -1.82
PTPRMP28827 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPRMP28827 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPRMP28827 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPRMP28827 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPRMP28827 RANP7-201ENST00000418085 644 ntBASIC3.67□□□□□ -1.82
PTPRMP28827 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPRMP28827 AC091917.2-201ENST00000505002 744 ntBASIC3.67□□□□□ -1.82
PTPRMP28827 NDUFA5P6-201ENST00000542110 379 ntBASIC3.67□□□□□ -1.82
PTPRMP28827 MIR3605-201ENST00000583214 100 ntBASIC3.67□□□□□ -1.82
PTPRMP28827 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPRMP28827 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPRMP28827 AC022960.2-201ENST00000616300 666 ntBASIC3.67□□□□□ -1.82
PTPRMP28827 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPRMP28827 AC008264.2-201ENST00000610193 3731 ntBASIC3.67□□□□□ -1.82
PTPRMP28827 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms