Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
ATF4P18848 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.93□□□□□ -1.62
ATF4P18848 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ATF4P18848 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ATF4P18848 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATF4P18848 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ATF4P18848 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.93□□□□□ -1.62
ATF4P18848 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATF4P18848 RNU4-73P-201ENST00000363164 141 ntBASIC4.93□□□□□ -1.62
ATF4P18848 SNORA7.2-201ENST00000364446 145 ntBASIC4.93□□□□□ -1.62
ATF4P18848 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATF4P18848 UBE2V1P2-201ENST00000397758 440 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AL356432.1-201ENST00000405809 419 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC007390.1-201ENST00000415722 356 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC006509.1-201ENST00000420788 634 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AL645937.1-202ENST00000421799 937 ntBASIC4.93□□□□□ -1.62
ATF4P18848 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.93□□□□□ -1.62
ATF4P18848 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.93□□□□□ -1.62
ATF4P18848 AC092001.1-201ENST00000453012 261 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AMD1P1-201ENST00000457220 922 ntBASIC4.93□□□□□ -1.62
ATF4P18848 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 RPL37P6-201ENST00000460682 294 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC004801.2-202ENST00000463559 283 ntBASIC4.93□□□□□ -1.62
ATF4P18848 RPL7P19-201ENST00000469948 618 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC044810.1-201ENST00000480271 711 ntBASIC4.93□□□□□ -1.62
ATF4P18848 RN7SL727P-201ENST00000482164 296 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 HMGB1P22-201ENST00000505315 124 ntBASIC4.93□□□□□ -1.62
ATF4P18848 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 FGF7P4-201ENST00000509595 295 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC007016.1-201ENST00000512110 244 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.93□□□□□ -1.62
ATF4P18848 RPL7P20-201ENST00000520308 745 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATF4P18848 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
ATF4P18848 GLYCAM1-201ENST00000546596 285 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC011611.1-201ENST00000552179 197 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.93□□□□□ -1.62
ATF4P18848 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.93□□□□□ -1.62
ATF4P18848 AC005498.1-201ENST00000592125 465 ntBASIC4.93□□□□□ -1.62
ATF4P18848 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.93□□□□□ -1.62
ATF4P18848 DPPA3P3-201ENST00000603842 430 ntBASIC4.93□□□□□ -1.62
ATF4P18848 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.93□□□□□ -1.62
ATF4P18848 uc_338.31-201ENST00000615595 186 ntBASIC4.93□□□□□ -1.62
ATF4P18848 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.93□□□□□ -1.62
ATF4P18848 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.93□□□□□ -1.62
ATF4P18848 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATF4P18848 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATF4P18848 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATF4P18848 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ATF4P18848 AC139713.2-214ENST00000642059 1811 ntBASIC4.93□□□□□ -1.62
ATF4P18848 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.92□□□□□ -1.62
ATF4P18848 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.92□□□□□ -1.62
ATF4P18848 AL731566.1-201ENST00000620490 1937 ntBASIC4.92□□□□□ -1.62
ATF4P18848 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 RNU6-82P-201ENST00000363970 107 ntBASIC4.92□□□□□ -1.62
ATF4P18848 RN7SKP187-201ENST00000365536 330 ntBASIC4.92□□□□□ -1.62
ATF4P18848 Y_RNA.530-201ENST00000384587 101 ntBASIC4.92□□□□□ -1.62
ATF4P18848 RNA5SP155-201ENST00000411154 129 ntBASIC4.92□□□□□ -1.62
ATF4P18848 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.92□□□□□ -1.62
ATF4P18848 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.92□□□□□ -1.62
ATF4P18848 RPL24P2-201ENST00000421023 475 ntBASIC4.92□□□□□ -1.62
ATF4P18848 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.92□□□□□ -1.62
ATF4P18848 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.92□□□□□ -1.62
ATF4P18848 USP9YP7-201ENST00000436723 430 ntBASIC4.92□□□□□ -1.62
ATF4P18848 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.92□□□□□ -1.62
ATF4P18848 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.92□□□□□ -1.62
ATF4P18848 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.92□□□□□ -1.62
ATF4P18848 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.92□□□□□ -1.62
ATF4P18848 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.92□□□□□ -1.62
ATF4P18848 USP9YP32-201ENST00000452432 430 ntBASIC4.92□□□□□ -1.62
ATF4P18848 RPS27AP3-201ENST00000453803 454 ntBASIC4.92□□□□□ -1.62
ATF4P18848 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.92□□□□□ -1.62
ATF4P18848 SCARNA18-201ENST00000459004 134 ntBASIC4.92□□□□□ -1.62
ATF4P18848 Y_RNA.654-201ENST00000497848 106 ntBASIC4.92□□□□□ -1.62
ATF4P18848 AC090958.1-201ENST00000511122 351 ntBASIC4.92□□□□□ -1.62
ATF4P18848 RNU4-49P-201ENST00000516080 140 ntBASIC4.92□□□□□ -1.62
ATF4P18848 Y_RNA.665-201ENST00000516177 98 ntBASIC4.92□□□□□ -1.62
ATF4P18848 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.92□□□□□ -1.62
ATF4P18848 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.92□□□□□ -1.62
ATF4P18848 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms