Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF3P18847 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF3P18847 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF3P18847 AC025811.1-201ENST00000604312 472 ntBASIC5.24□□□□□ -1.57
ATF3P18847 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF3P18847 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF3P18847 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.24□□□□□ -1.57
ATF3P18847 MTND4P34-201ENST00000572715 1371 ntBASIC5.24□□□□□ -1.57
ATF3P18847 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATF3P18847 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATF3P18847 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.23□□□□□ -1.57
ATF3P18847 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF3P18847 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ATF3P18847 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 MIR153-1-201ENST00000384914 90 ntBASIC5.23□□□□□ -1.57
ATF3P18847 SNORD96B-201ENST00000386148 79 ntBASIC5.23□□□□□ -1.57
ATF3P18847 SNORA48.5-201ENST00000391143 135 ntBASIC5.23□□□□□ -1.57
ATF3P18847 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 RAP1BP1-201ENST00000412709 553 ntBASIC5.23□□□□□ -1.57
ATF3P18847 RPL31P45-201ENST00000419532 356 ntBASIC5.23□□□□□ -1.57
ATF3P18847 AC005300.1-201ENST00000428401 373 ntBASIC5.23□□□□□ -1.57
ATF3P18847 HMGB1P37-201ENST00000439613 609 ntBASIC5.23□□□□□ -1.57
ATF3P18847 RPL29P29-201ENST00000448725 423 ntBASIC5.23□□□□□ -1.57
ATF3P18847 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF3P18847 TRGVB-201ENST00000453257 471 ntBASIC5.23□□□□□ -1.57
ATF3P18847 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF3P18847 AL109741.2-201ENST00000455561 343 ntBASIC5.23□□□□□ -1.57
ATF3P18847 ATG12P2-201ENST00000456830 416 ntBASIC5.23□□□□□ -1.57
ATF3P18847 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF3P18847 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF3P18847 HIGD1AP3-201ENST00000515857 278 ntBASIC5.23□□□□□ -1.57
ATF3P18847 RNU6-1129P-201ENST00000515964 104 ntBASIC5.23□□□□□ -1.57
ATF3P18847 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF3P18847 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF3P18847 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF3P18847 OR8L1P-201ENST00000534005 955 ntBASIC5.23□□□□□ -1.57
ATF3P18847 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF3P18847 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.23□□□□□ -1.57
ATF3P18847 AL359219.2-201ENST00000555184 348 ntBASIC5.23□□□□□ -1.57
ATF3P18847 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF3P18847 HMGB3P26-201ENST00000560051 582 ntBASIC5.23□□□□□ -1.57
ATF3P18847 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF3P18847 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF3P18847 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF3P18847 AL353778.1-201ENST00000603149 408 ntBASIC5.23□□□□□ -1.57
ATF3P18847 AC004987.4-201ENST00000603383 338 ntBASIC5.23□□□□□ -1.57
ATF3P18847 AC104662.1-201ENST00000604448 511 ntBASIC5.23□□□□□ -1.57
ATF3P18847 AL139344.1-201ENST00000605228 195 ntBASIC5.23□□□□□ -1.57
ATF3P18847 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF3P18847 AC000374.1-201ENST00000434698 1745 ntBASIC5.23□□□□□ -1.57
ATF3P18847 PABPC1P7-201ENST00000413177 1513 ntBASIC5.23□□□□□ -1.57
ATF3P18847 OR5BR1P-201ENST00000524992 1330 ntBASIC5.23□□□□□ -1.57
ATF3P18847 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
ATF3P18847 MFSD8-236ENST00000641509 4050 ntBASIC5.22□□□□□ -1.57
ATF3P18847 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF3P18847 SGO1P2-201ENST00000429458 1589 ntBASIC5.22□□□□□ -1.57
ATF3P18847 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF3P18847 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ATF3P18847 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATF3P18847 AL133383.2-201ENST00000622958 2336 ntBASIC5.22□□□□□ -1.57
ATF3P18847 AP001273.1-201ENST00000624493 3152 ntBASIC5.22□□□□□ -1.57
ATF3P18847 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.22□□□□□ -1.57
ATF3P18847 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ATF3P18847 SNORD9-201ENST00000362566 104 ntBASIC5.22□□□□□ -1.57
ATF3P18847 SNRPEP2-201ENST00000397592 279 ntBASIC5.22□□□□□ -1.57
ATF3P18847 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 AL445433.1-201ENST00000457507 257 ntBASIC5.22□□□□□ -1.57
ATF3P18847 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ATF3P18847 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.22□□□□□ -1.57
ATF3P18847 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 OR4G1P-201ENST00000588632 938 ntBASIC5.22□□□□□ -1.57
ATF3P18847 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 AC012493.2-201ENST00000595083 291 ntBASIC5.22□□□□□ -1.57
ATF3P18847 AL009028.1-201ENST00000604895 802 ntBASIC5.22□□□□□ -1.57
ATF3P18847 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 AC243773.3-201ENST00000613270 256 ntBASIC5.22□□□□□ -1.57
ATF3P18847 AL139418.1-201ENST00000613613 177 ntBASIC5.22□□□□□ -1.57
ATF3P18847 AC067852.7-201ENST00000623270 535 ntBASIC5.22□□□□□ -1.57
ATF3P18847 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ATF3P18847 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATF3P18847 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.22□□□□□ -1.57
ATF3P18847 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATF3P18847 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ATF3P18847 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF3P18847 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ATF3P18847 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.21□□□□□ -1.58
ATF3P18847 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATF3P18847 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
ATF3P18847 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.21□□□□□ -1.58
ATF3P18847 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms