Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-1309P-201ENST00000363305 108 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-1243P-201ENST00000364028 107 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 Y_RNA.259-201ENST00000364619 101 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-784P-201ENST00000384330 106 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC245054.2-201ENST00000415639 319 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AF186996.5-201ENST00000418098 904 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC105402.2-201ENST00000438503 358 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 CBX1P1-201ENST00000440184 427 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 RPS27AP17-201ENST00000463344 455 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AL136126.1-201ENST00000473603 402 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC023194.1-201ENST00000493084 308 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-201P-201ENST00000517100 61 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AL109766.1-201ENST00000555080 552 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC110588.1-201ENST00000559699 137 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 MIR4503-201ENST00000582187 83 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 RPL23AP92-201ENST00000603609 255 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC090948.1-201ENST00000607464 549 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AL161734.1-201ENST00000609720 557 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 DISC2.1-201ENST00000612827 205 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 AC010149.2-201ENST00000637608 315 ntBASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.79□□□□□ -1.32
CSB-PGBD3P0DP91 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 RNU6-28P-201ENST00000362378 107 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 SNORA69-201ENST00000383895 132 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 SNORA32.2-201ENST00000384049 122 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 RNU2-39P-201ENST00000410604 198 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC113618.1-201ENST00000416747 285 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC009302.1-201ENST00000417147 390 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AL606489.2-201ENST00000433886 234 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 GTF2IP13-201ENST00000438487 386 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 IGHV5-78-201ENST00000450948 295 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC009963.2-201ENST00000453431 138 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 RPS20P32-201ENST00000456044 356 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 RN7SL443P-201ENST00000464331 290 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 PLGLA-201ENST00000465668 449 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 BTF3P12-201ENST00000519620 469 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC022616.6-201ENST00000520479 119 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC087241.2-201ENST00000535801 324 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 RN7SL802P-201ENST00000577858 299 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AL353997.4-201ENST00000586196 166 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 RPL26P30-202ENST00000602923 645 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 7SK.7-201ENST00000603504 247 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC108738.1-201ENST00000603703 237 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC011468.4-201ENST00000603942 409 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AL391358.1-201ENST00000605342 190 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AL139124.1-201ENST00000609123 421 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AL138960.1-201ENST00000613838 513 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC015908.5-201ENST00000623289 343 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AC119674.1-207ENST00000641355 633 ntBASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CSB-PGBD3P0DP91 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CSB-PGBD3P0DP91 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
CSB-PGBD3P0DP91 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
CSB-PGBD3P0DP91 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.32
CSB-PGBD3P0DP91 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.77□□□□□ -1.33
CSB-PGBD3P0DP91 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms