Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC092832.1-201ENST00000422934 400 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.38□□□□□ -2.03
FREM3P0C091 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.38□□□□□ -2.03
FREM3P0C091 ELOCP6-201ENST00000429066 328 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 ELOCP12-201ENST00000458706 328 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 RPL23AP44-201ENST00000482216 473 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.38□□□□□ -2.03
FREM3P0C091 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.38□□□□□ -2.03
FREM3P0C091 RNA5SP385-201ENST00000515947 110 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 SERPINE4P-201ENST00000554978 281 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.38□□□□□ -2.03
FREM3P0C091 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.38□□□□□ -2.03
FREM3P0C091 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.38□□□□□ -2.03
FREM3P0C091 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FREM3P0C091 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.38□□□□□ -2.03
FREM3P0C091 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FREM3P0C091 RN7SKP223-201ENST00000410582 62 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.38□□□□□ -2.03
FREM3P0C091 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.38□□□□□ -2.03
FREM3P0C091 AC009963.1-201ENST00000417265 157 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 MTCYBP7-201ENST00000419540 1134 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.38□□□□□ -2.03
FREM3P0C091 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.38□□□□□ -2.03
FREM3P0C091 AC078785.3-201ENST00000476607 425 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.38□□□□□ -2.03
FREM3P0C091 SNORA9.3-201ENST00000516383 129 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.38□□□□□ -2.03
FREM3P0C091 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.38□□□□□ -2.03
FREM3P0C091 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.38□□□□□ -2.03
FREM3P0C091 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.38□□□□□ -2.03
FREM3P0C091 AC136601.2-201ENST00000604356 474 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 AC013412.1-201ENST00000610687 192 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 MIR6715A-201ENST00000615929 79 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 AL133370.2-201ENST00000619934 439 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 AC004943.3-201ENST00000624116 600 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FREM3P0C091 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.38□□□□□ -2.03
FREM3P0C091 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
FREM3P0C091 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FREM3P0C091 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FREM3P0C091 AC087565.3-202ENST00000642085 1603 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.37□□□□□ -2.03
FREM3P0C091 ZNF33CP-201ENST00000432492 2030 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
FREM3P0C091 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
FREM3P0C091 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FREM3P0C091 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FREM3P0C091 SNORA25.6-201ENST00000364121 118 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.37□□□□□ -2.03
FREM3P0C091 RPL23AP31-201ENST00000456160 467 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 RPS3P1-201ENST00000456781 192 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 AC108860.1-201ENST00000484521 383 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.37□□□□□ -2.03
FREM3P0C091 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.37□□□□□ -2.03
FREM3P0C091 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.37□□□□□ -2.03
FREM3P0C091 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.37□□□□□ -2.03
FREM3P0C091 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.37□□□□□ -2.03
FREM3P0C091 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.37□□□□□ -2.03
FREM3P0C091 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.37□□□□□ -2.03
FREM3P0C091 ABI1P1-201ENST00000603375 1120 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 AC069234.5-201ENST00000611056 416 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 AP003072.4-201ENST00000624580 310 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
FREM3P0C091 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.37□□□□□ -2.03
FREM3P0C091 AL359693.1-201ENST00000614959 2407 ntBASIC2.37□□□□□ -2.03
FREM3P0C091 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
FREM3P0C091 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
FREM3P0C091 SNORD62.1-201ENST00000362541 86 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 RNU6-356P-201ENST00000384140 107 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 SNORA70B-201ENST00000384210 135 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 MIR196B-201ENST00000384852 84 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
FREM3P0C091 AL590004.2-201ENST00000404787 371 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 USP9YP7-201ENST00000436723 430 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AL353898.1-201ENST00000444055 238 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.36□□□□□ -2.03
FREM3P0C091 USP9YP32-201ENST00000452432 430 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AC114781.4-201ENST00000513707 639 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 RNA5SP320-201ENST00000516263 124 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 RNA5SP148-201ENST00000516527 94 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AP002812.4-201ENST00000532139 286 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 DNAJC19P3-201ENST00000594491 331 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AC002076.2-201ENST00000617362 122 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AC006065.5-201ENST00000623427 349 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AC243829.7-201ENST00000633081 225 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AC084035.1-201ENST00000634543 607 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
FREM3P0C091 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
FREM3P0C091 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
FREM3P0C091 RNA5SP126-201ENST00000365092 109 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.36□□□□□ -2.03
FREM3P0C091 CCNB2P1-201ENST00000399411 1150 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 MRPL35P4-201ENST00000453682 566 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 MIR4635-201ENST00000583759 79 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AC006116.7-201ENST00000590141 756 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 AC010338.1-201ENST00000621823 717 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.36□□□□□ -2.03
FREM3P0C091 ELF2P3-201ENST00000445099 1506 ntBASIC2.36□□□□□ -2.03
FREM3P0C091 RNF6P1-201ENST00000444889 1784 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms