Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.34□□□□□ -1.87
TPM1P09493 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.34□□□□□ -1.87
TPM1P09493 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
TPM1P09493 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.34□□□□□ -1.87
TPM1P09493 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.34□□□□□ -1.87
TPM1P09493 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.34□□□□□ -1.87
TPM1P09493 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM1P09493 AP001029.3-201ENST00000588063 596 ntBASIC3.34□□□□□ -1.87
TPM1P09493 AC083760.1-201ENST00000589621 670 ntBASIC3.34□□□□□ -1.87
TPM1P09493 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM1P09493 AC073387.2-201ENST00000604797 784 ntBASIC3.34□□□□□ -1.87
TPM1P09493 AL359198.2-201ENST00000611836 194 ntBASIC3.34□□□□□ -1.87
TPM1P09493 AC099506.2-201ENST00000623074 221 ntBASIC3.34□□□□□ -1.87
TPM1P09493 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM1P09493 MIR6733-201ENST00000635723 61 ntBASIC3.34□□□□□ -1.87
TPM1P09493 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM1P09493 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TPM1P09493 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM1P09493 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM1P09493 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM1P09493 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM1P09493 AL357075.1-201ENST00000404107 726 ntBASIC3.33□□□□□ -1.88
TPM1P09493 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM1P09493 AC063979.1-201ENST00000415539 377 ntBASIC3.33□□□□□ -1.88
TPM1P09493 RPF2P1-201ENST00000424137 906 ntBASIC3.33□□□□□ -1.88
TPM1P09493 SNRPEP4-201ENST00000435815 279 ntBASIC3.33□□□□□ -1.88
TPM1P09493 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.33□□□□□ -1.88
TPM1P09493 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM1P09493 GAPDHP39-201ENST00000481866 979 ntBASIC3.33□□□□□ -1.88
TPM1P09493 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM1P09493 MTCYBP37-201ENST00000510642 1133 ntBASIC3.33□□□□□ -1.88
TPM1P09493 AC026403.1-201ENST00000518938 295 ntBASIC3.33□□□□□ -1.88
TPM1P09493 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM1P09493 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM1P09493 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.33□□□□□ -1.88
TPM1P09493 PRELID3BP8-201ENST00000604148 295 ntBASIC3.33□□□□□ -1.88
TPM1P09493 AC008962.1-201ENST00000605729 304 ntBASIC3.33□□□□□ -1.88
TPM1P09493 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.33□□□□□ -1.88
TPM1P09493 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM1P09493 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM1P09493 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
TPM1P09493 SNORA27.3-201ENST00000364937 134 ntBASIC3.32□□□□□ -1.88
TPM1P09493 SSXP10-201ENST00000402595 565 ntBASIC3.32□□□□□ -1.88
TPM1P09493 RPS3AP9-201ENST00000417027 792 ntBASIC3.32□□□□□ -1.88
TPM1P09493 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TPM1P09493 RFESDP1-201ENST00000422350 461 ntBASIC3.32□□□□□ -1.88
TPM1P09493 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TPM1P09493 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.32□□□□□ -1.88
TPM1P09493 AC073508.1-201ENST00000428866 656 ntBASIC3.32□□□□□ -1.88
TPM1P09493 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.32□□□□□ -1.88
TPM1P09493 RSL24D1P2-201ENST00000445584 366 ntBASIC3.32□□□□□ -1.88
TPM1P09493 AL133547.1-201ENST00000448546 220 ntBASIC3.32□□□□□ -1.88
TPM1P09493 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.32□□□□□ -1.88
TPM1P09493 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.32□□□□□ -1.88
TPM1P09493 AL136126.1-201ENST00000473603 402 ntBASIC3.32□□□□□ -1.88
TPM1P09493 RPS27AP9-201ENST00000477681 438 ntBASIC3.32□□□□□ -1.88
TPM1P09493 RNU6-760P-201ENST00000516078 97 ntBASIC3.32□□□□□ -1.88
TPM1P09493 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.32□□□□□ -1.88
TPM1P09493 AC022690.1-201ENST00000526681 550 ntBASIC3.32□□□□□ -1.88
TPM1P09493 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.32□□□□□ -1.88
TPM1P09493 AC092470.1-201ENST00000546187 132 ntBASIC3.32□□□□□ -1.88
TPM1P09493 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.32□□□□□ -1.88
TPM1P09493 AC017100.2-201ENST00000584628 355 ntBASIC3.32□□□□□ -1.88
TPM1P09493 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.32□□□□□ -1.88
TPM1P09493 CKS1BP3-201ENST00000600888 237 ntBASIC3.32□□□□□ -1.88
TPM1P09493 AC135178.6-201ENST00000605314 398 ntBASIC3.32□□□□□ -1.88
TPM1P09493 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.32□□□□□ -1.88
TPM1P09493 CR589904.2-201ENST00000612533 440 ntBASIC3.32□□□□□ -1.88
TPM1P09493 AC231759.1-201ENST00000616455 597 ntBASIC3.32□□□□□ -1.88
TPM1P09493 AC138932.5-201ENST00000617759 563 ntBASIC3.32□□□□□ -1.88
TPM1P09493 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TPM1P09493 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TPM1P09493 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TPM1P09493 AP002907.1-201ENST00000606361 1430 ntBASIC3.31□□□□□ -1.88
TPM1P09493 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TPM1P09493 MIR181B1-201ENST00000385240 110 ntBASIC3.31□□□□□ -1.88
TPM1P09493 SNORA57.1-201ENST00000391227 145 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.31□□□□□ -1.88
TPM1P09493 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM1P09493 AL451074.5-201ENST00000415894 435 ntBASIC3.31□□□□□ -1.88
TPM1P09493 MTCO3P12-201ENST00000416718 547 ntBASIC3.31□□□□□ -1.88
TPM1P09493 MTATP6P4-201ENST00000427725 675 ntBASIC3.31□□□□□ -1.88
TPM1P09493 SAR1AP4-201ENST00000429225 591 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC018644.1-201ENST00000429934 551 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM1P09493 AC011242.1-201ENST00000433596 1158 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
TPM1P09493 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM1P09493 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM1P09493 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.31□□□□□ -1.88
TPM1P09493 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.31□□□□□ -1.88
TPM1P09493 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM1P09493 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM1P09493 AC084824.1-201ENST00000550917 1005 ntBASIC3.31□□□□□ -1.88
TPM1P09493 SETP2-201ENST00000553886 926 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.31□□□□□ -1.88
TPM1P09493 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM1P09493 RN7SL339P-201ENST00000580597 296 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC005412.1-201ENST00000580812 1049 ntBASIC3.31□□□□□ -1.88
TPM1P09493 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms