Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 BNIP3P26-201ENST00000600827 554 ntBASIC3.73□□□□□ -1.81
VIMP08670 XIAPP1-201ENST00000603162 600 ntBASIC3.73□□□□□ -1.81
VIMP08670 AC103881.1-201ENST00000603476 538 ntBASIC3.73□□□□□ -1.81
VIMP08670 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.73□□□□□ -1.81
VIMP08670 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.73□□□□□ -1.81
VIMP08670 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.73□□□□□ -1.81
VIMP08670 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.73□□□□□ -1.81
VIMP08670 AC018755.4-201ENST00000619715 454 ntBASIC3.73□□□□□ -1.81
VIMP08670 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.73□□□□□ -1.81
VIMP08670 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.73□□□□□ -1.81
VIMP08670 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VIMP08670 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.73□□□□□ -1.81
VIMP08670 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
VIMP08670 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.73□□□□□ -1.81
VIMP08670 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.72□□□□□ -1.81
VIMP08670 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.72□□□□□ -1.81
VIMP08670 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VIMP08670 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
VIMP08670 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VIMP08670 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 RNU6-906P-201ENST00000384700 70 ntBASIC3.72□□□□□ -1.81
VIMP08670 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VIMP08670 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VIMP08670 RNU6-1242P-201ENST00000391052 103 ntBASIC3.72□□□□□ -1.81
VIMP08670 SNORA48.8-201ENST00000391324 134 ntBASIC3.72□□□□□ -1.81
VIMP08670 RNA5SP293-201ENST00000410527 113 ntBASIC3.72□□□□□ -1.81
VIMP08670 TPT1P2-201ENST00000413105 503 ntBASIC3.72□□□□□ -1.81
VIMP08670 HMGB3P20-201ENST00000417997 600 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC012065.2-201ENST00000421295 375 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.72□□□□□ -1.81
VIMP08670 AL662791.1-201ENST00000441992 928 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.72□□□□□ -1.81
VIMP08670 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.72□□□□□ -1.81
VIMP08670 AC010401.1-201ENST00000463867 348 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC087312.1-201ENST00000471411 480 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC007686.1-201ENST00000488511 463 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.72□□□□□ -1.81
VIMP08670 AC021146.5-201ENST00000503544 545 ntBASIC3.72□□□□□ -1.81
VIMP08670 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 AC110768.1-201ENST00000509222 400 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC026412.2-201ENST00000512270 1075 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 RN7SKP244-201ENST00000516513 307 ntBASIC3.72□□□□□ -1.81
VIMP08670 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.72□□□□□ -1.81
VIMP08670 OR7E13P-201ENST00000526052 910 ntBASIC3.72□□□□□ -1.81
VIMP08670 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.72□□□□□ -1.81
VIMP08670 AP000619.3-201ENST00000535634 1127 ntBASIC3.72□□□□□ -1.81
VIMP08670 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.72□□□□□ -1.81
VIMP08670 AC006960.3-201ENST00000561845 705 ntBASIC3.72□□□□□ -1.81
VIMP08670 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.72□□□□□ -1.81
VIMP08670 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.72□□□□□ -1.81
VIMP08670 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.72□□□□□ -1.81
VIMP08670 MIR4284-201ENST00000578924 81 ntBASIC3.72□□□□□ -1.81
VIMP08670 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.72□□□□□ -1.81
VIMP08670 AC009974.1-201ENST00000608881 455 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC090912.3-201ENST00000609775 533 ntBASIC3.72□□□□□ -1.81
VIMP08670 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VIMP08670 AC079684.1-201ENST00000621405 437 ntBASIC3.72□□□□□ -1.81
VIMP08670 AC011944.2-201ENST00000624440 683 ntBASIC3.72□□□□□ -1.81
VIMP08670 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.72□□□□□ -1.81
VIMP08670 MIR1322-201ENST00000638013 71 ntBASIC3.72□□□□□ -1.81
VIMP08670 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.72□□□□□ -1.81
VIMP08670 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.72□□□□□ -1.81
VIMP08670 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.72□□□□□ -1.81
VIMP08670 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VIMP08670 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VIMP08670 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.72□□□□□ -1.81
VIMP08670 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.71□□□□□ -1.81
VIMP08670 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.71□□□□□ -1.81
VIMP08670 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
VIMP08670 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VIMP08670 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VIMP08670 RNU6-805P-201ENST00000365643 106 ntBASIC3.71□□□□□ -1.82
VIMP08670 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VIMP08670 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.71□□□□□ -1.82
VIMP08670 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VIMP08670 RNU6-55P-201ENST00000411092 107 ntBASIC3.71□□□□□ -1.82
VIMP08670 RNU6-954P-201ENST00000411355 107 ntBASIC3.71□□□□□ -1.82
VIMP08670 RPS7P13-201ENST00000413955 498 ntBASIC3.71□□□□□ -1.82
VIMP08670 RPS27AP7-201ENST00000422792 455 ntBASIC3.71□□□□□ -1.82
VIMP08670 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.71□□□□□ -1.82
VIMP08670 AL050321.1-201ENST00000432363 400 ntBASIC3.71□□□□□ -1.82
VIMP08670 CBX1P1-201ENST00000440184 427 ntBASIC3.71□□□□□ -1.82
VIMP08670 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.71□□□□□ -1.82
VIMP08670 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.71□□□□□ -1.82
VIMP08670 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.71□□□□□ -1.82
VIMP08670 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.71□□□□□ -1.82
VIMP08670 MTCO2P25-201ENST00000447065 681 ntBASIC3.71□□□□□ -1.82
VIMP08670 USP9YP34-201ENST00000453983 808 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms