Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 OR8L1P-201ENST00000534005 955 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC007954.1-201ENST00000554198 494 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC010735.1-201ENST00000567305 1026 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC006504.3-201ENST00000586818 523 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC006116.7-201ENST00000590141 756 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AL033523.1-201ENST00000605153 153 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC016877.3-201ENST00000606778 504 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC135507.2-201ENST00000612443 309 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC107871.2-201ENST00000612894 502 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC107905.1-201ENST00000616204 426 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 MAPK10-362ENST00000641864 4484 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 RNU4-31P-201ENST00000384211 141 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 OR2B8P-201ENST00000432841 938 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AC112220.1-201ENST00000434628 355 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AL662791.1-201ENST00000441992 928 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 RPS24P13-201ENST00000442520 397 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 RPL7P59-201ENST00000447700 943 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AC090525.1-201ENST00000479116 478 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 HMGB1P3-201ENST00000502802 616 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 MTND4LP22-201ENST00000508209 276 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 FABP5P6-201ENST00000510588 409 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 RNA5SP385-201ENST00000515947 110 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 CENPUP2-201ENST00000555897 1186 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 U6.48-201ENST00000618523 106 ntBASIC2.78□□□□□ -1.96
HLA-DQB2P05538 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DQB2P05538 XPOTP1-201ENST00000443317 2398 ntBASIC2.78□□□□□ -1.97
HLA-DQB2P05538 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 RNA5SP295-201ENST00000362655 121 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 AL512633.1-201ENST00000399931 655 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 RNA5SP129-201ENST00000410276 118 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 Z92545.1-201ENST00000411782 234 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 TPTE2P6-202ENST00000445572 1007 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 AL590399.6-201ENST00000446396 307 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 AC089999.1-201ENST00000460336 374 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 RPL21P18-201ENST00000469899 480 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 RPS3AP14-201ENST00000483907 780 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 RN7SKP277-201ENST00000516895 283 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 AC005951.1-201ENST00000576706 485 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 AC096947.1-201ENST00000603233 470 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 SAGE4P-201ENST00000442271 3381 ntBASIC2.77□□□□□ -1.97
HLA-DQB2P05538 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQB2P05538 AC009487.2-201ENST00000420969 6821 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AL161431.1-201ENST00000618966 4205 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 RNU6-1293P-201ENST00000384077 107 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 DNAJC19P6-201ENST00000401853 280 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 RN7SKP123-201ENST00000410732 291 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 RNA5SP21-201ENST00000410917 96 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 RNF19BPX-201ENST00000426224 625 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC093151.1-201ENST00000427711 313 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AL590103.1-201ENST00000434488 307 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC105272.1-201ENST00000438604 198 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 RPL23AP33-201ENST00000442301 452 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC025750.2-201ENST00000442609 450 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 MRPL50P4-201ENST00000446432 475 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 GAPDHP27-201ENST00000447427 1020 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms