Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 MTND1P36-201ENST00000522384 936 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 HMGB1P1-201ENST00000522557 636 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AC092451.2-201ENST00000538746 658 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 CR383656.14-201ENST00000551951 406 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 ZNF971P-201ENST00000562068 1249 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AC005412.1-201ENST00000580812 1049 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 OR4G1P-201ENST00000588632 938 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPB1P04440 BNIP3P19-201ENST00000605397 577 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AL355365.1-201ENST00000616480 294 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AL161912.2-201ENST00000565707 3007 ntBASIC2.87□□□□□ -1.95
HLA-DPB1P04440 AC108206.1-201ENST00000570186 4159 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 RNU5B-1-201ENST00000363286 116 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 DYNLT3P1-201ENST00000378574 347 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 MIR23B-201ENST00000384832 97 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 RNU6-575P-201ENST00000411326 105 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 RPS3AP9-201ENST00000417027 792 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 OR1AA1P-201ENST00000419597 916 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC114973.1-201ENST00000429057 632 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 YME1L1P1-201ENST00000429435 297 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AL138799.3-201ENST00000438968 350 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 ATP5C1P1-201ENST00000441945 895 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 HMGB3P30-201ENST00000457863 606 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 RPL9P32-201ENST00000464118 620 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC118282.1-201ENST00000506408 765 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC119751.1-201ENST00000513357 765 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 DUXAP2-201ENST00000519198 589 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC011611.1-201ENST00000552179 197 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC005476.1-201ENST00000554427 397 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC092574.1-201ENST00000609771 420 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC022079.2-201ENST00000619739 566 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 AC093875.1-201ENST00000623688 504 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 OR8B1P-202ENST00000641132 1178 ntBASIC2.86□□□□□ -1.95
HLA-DPB1P04440 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
HLA-DPB1P04440 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 PABPC1P7-201ENST00000413177 1513 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RNU1-70P-201ENST00000362618 164 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RNU1-85P-201ENST00000364127 164 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RNU6-374P-201ENST00000364146 108 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 SNORD6-201ENST00000365444 73 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RNU6-921P-201ENST00000384361 107 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RPS3AP25-201ENST00000411660 793 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AL159987.2-201ENST00000432754 307 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 CYCSP43-201ENST00000438233 310 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC002542.1-201ENST00000440683 193 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 SEPT14P24-201ENST00000447236 180 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC008155.2-201ENST00000464337 397 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 PLGLA-201ENST00000465668 449 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RPL7P38-201ENST00000488396 739 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AP001086.1-201ENST00000494882 321 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC093663.1-201ENST00000497190 394 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC091860.1-201ENST00000505723 432 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 POU5F1P7-201ENST00000508759 541 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms