Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.55□□□□□ -2
APOC1P02654 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOC1P02654 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOC1P02654 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.54□□□□□ -2
APOC1P02654 MTCO1P24-201ENST00000515438 1558 ntBASIC2.54□□□□□ -2
APOC1P02654 ASNSP3-201ENST00000451989 1306 ntBASIC2.54□□□□□ -2
APOC1P02654 RPL9P7-201ENST00000330965 580 ntBASIC2.54□□□□□ -2
APOC1P02654 SNORA25.6-201ENST00000364121 118 ntBASIC2.54□□□□□ -2
APOC1P02654 RNVU1-14-201ENST00000384770 164 ntBASIC2.54□□□□□ -2
APOC1P02654 RNU2-25P-201ENST00000411041 191 ntBASIC2.54□□□□□ -2
APOC1P02654 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.54□□□□□ -2
APOC1P02654 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.54□□□□□ -2
APOC1P02654 RPS20P5-201ENST00000434808 360 ntBASIC2.54□□□□□ -2
APOC1P02654 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.54□□□□□ -2
APOC1P02654 AL109741.2-201ENST00000455561 343 ntBASIC2.54□□□□□ -2
APOC1P02654 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.54□□□□□ -2
APOC1P02654 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.54□□□□□ -2
APOC1P02654 AL672167.3-201ENST00000465951 960 ntBASIC2.54□□□□□ -2
APOC1P02654 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.54□□□□□ -2
APOC1P02654 AL024509.2-201ENST00000493462 493 ntBASIC2.54□□□□□ -2
APOC1P02654 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
APOC1P02654 AC117522.3-201ENST00000507974 584 ntBASIC2.54□□□□□ -2
APOC1P02654 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.54□□□□□ -2
APOC1P02654 AC010625.1-201ENST00000511296 403 ntBASIC2.54□□□□□ -2
APOC1P02654 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.54□□□□□ -2
APOC1P02654 AC008885.1-201ENST00000514930 301 ntBASIC2.54□□□□□ -2
APOC1P02654 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
APOC1P02654 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.54□□□□□ -2
APOC1P02654 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.54□□□□□ -2
APOC1P02654 AC006539.2-201ENST00000601729 572 ntBASIC2.54□□□□□ -2
APOC1P02654 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.54□□□□□ -2
APOC1P02654 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
APOC1P02654 AC069304.3-201ENST00000603938 1084 ntBASIC2.54□□□□□ -2
APOC1P02654 AL133507.1-201ENST00000605269 557 ntBASIC2.54□□□□□ -2
APOC1P02654 AC084036.1-201ENST00000609190 508 ntBASIC2.54□□□□□ -2
APOC1P02654 AC007275.1-201ENST00000621243 671 ntBASIC2.54□□□□□ -2
APOC1P02654 AC244100.1-202ENST00000621554 382 ntBASIC2.54□□□□□ -2
APOC1P02654 AC091953.5-201ENST00000622919 233 ntBASIC2.54□□□□□ -2
APOC1P02654 AC026422.1-201ENST00000623961 452 ntBASIC2.54□□□□□ -2
APOC1P02654 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.54□□□□□ -2
APOC1P02654 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.54□□□□□ -2
APOC1P02654 OR8B1P-202ENST00000641132 1178 ntBASIC2.54□□□□□ -2
APOC1P02654 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOC1P02654 AC010733.2-201ENST00000589496 5702 ntBASIC2.53□□□□□ -2
APOC1P02654 AC091564.4-201ENST00000533934 2194 ntBASIC2.53□□□□□ -2
APOC1P02654 MIR26A1-201ENST00000362205 77 ntBASIC2.53□□□□□ -2
APOC1P02654 RNU6-799P-201ENST00000363567 107 ntBASIC2.53□□□□□ -2
APOC1P02654 MIR670-201ENST00000390142 98 ntBASIC2.53□□□□□ -2
APOC1P02654 AL353692.2-201ENST00000407054 335 ntBASIC2.53□□□□□ -2
APOC1P02654 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.53□□□□□ -2
APOC1P02654 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.53□□□□□ -2
APOC1P02654 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.53□□□□□ -2
APOC1P02654 AJ239321.1-201ENST00000424255 564 ntBASIC2.53□□□□□ -2
APOC1P02654 PTP4A1P3-201ENST00000433661 420 ntBASIC2.53□□□□□ -2
APOC1P02654 AC023347.2-201ENST00000433994 462 ntBASIC2.53□□□□□ -2
APOC1P02654 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.53□□□□□ -2
APOC1P02654 AC234775.1-201ENST00000454247 670 ntBASIC2.53□□□□□ -2
APOC1P02654 RNU7-27P-201ENST00000459281 62 ntBASIC2.53□□□□□ -2
APOC1P02654 HMGB1P25-201ENST00000468402 607 ntBASIC2.53□□□□□ -2
APOC1P02654 AC006445.1-201ENST00000491925 405 ntBASIC2.53□□□□□ -2
APOC1P02654 RN7SL504P-201ENST00000494496 287 ntBASIC2.53□□□□□ -2
APOC1P02654 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.53□□□□□ -2
APOC1P02654 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.53□□□□□ -2
APOC1P02654 RNA5SP367-201ENST00000516557 118 ntBASIC2.53□□□□□ -2
APOC1P02654 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.53□□□□□ -2
APOC1P02654 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOC1P02654 OSBPL9P3-201ENST00000534523 595 ntBASIC2.53□□□□□ -2
APOC1P02654 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.53□□□□□ -2
APOC1P02654 HPRT1P3-201ENST00000539521 576 ntBASIC2.53□□□□□ -2
APOC1P02654 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.53□□□□□ -2
APOC1P02654 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.53□□□□□ -2
APOC1P02654 AC128657.1-201ENST00000549459 145 ntBASIC2.53□□□□□ -2
APOC1P02654 NBEAP1-201ENST00000554452 979 ntBASIC2.53□□□□□ -2
APOC1P02654 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.53□□□□□ -2
APOC1P02654 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.53□□□□□ -2
APOC1P02654 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.53□□□□□ -2
APOC1P02654 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.53□□□□□ -2
APOC1P02654 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.53□□□□□ -2
APOC1P02654 AC008962.1-201ENST00000605729 304 ntBASIC2.53□□□□□ -2
APOC1P02654 MIR4496-201ENST00000635896 61 ntBASIC2.53□□□□□ -2
APOC1P02654 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.53□□□□□ -2
APOC1P02654 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
APOC1P02654 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
APOC1P02654 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.52□□□□□ -2.01
APOC1P02654 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
APOC1P02654 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
APOC1P02654 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
APOC1P02654 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
APOC1P02654 SNORA48.7-201ENST00000391302 135 ntBASIC2.52□□□□□ -2.01
APOC1P02654 ANAPC10P1-201ENST00000395991 556 ntBASIC2.52□□□□□ -2.01
APOC1P02654 BTBD10P2-201ENST00000404779 676 ntBASIC2.52□□□□□ -2.01
APOC1P02654 AL590290.1-201ENST00000405336 380 ntBASIC2.52□□□□□ -2.01
APOC1P02654 AL138885.1-201ENST00000405921 675 ntBASIC2.52□□□□□ -2.01
APOC1P02654 LINC01881-201ENST00000416103 412 ntBASIC2.52□□□□□ -2.01
APOC1P02654 TOMM22P1-201ENST00000418578 312 ntBASIC2.52□□□□□ -2.01
APOC1P02654 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.52□□□□□ -2.01
APOC1P02654 SNRPEP4-201ENST00000435815 279 ntBASIC2.52□□□□□ -2.01
APOC1P02654 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.52□□□□□ -2.01
APOC1P02654 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.52□□□□□ -2.01
APOC1P02654 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms