Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC004925.1-201ENST00000624256 2706 ntBASIC3.1□□□□□ -1.91
APOEP02649 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOEP02649 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOEP02649 Z92545.1-201ENST00000411782 234 ntBASIC3.1□□□□□ -1.91
APOEP02649 AC096664.2-201ENST00000411843 406 ntBASIC3.1□□□□□ -1.91
APOEP02649 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
APOEP02649 AL160175.1-201ENST00000428124 247 ntBASIC3.1□□□□□ -1.91
APOEP02649 PSMA2P3-201ENST00000429685 675 ntBASIC3.1□□□□□ -1.91
APOEP02649 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.1□□□□□ -1.91
APOEP02649 RPL21P112-201ENST00000434403 463 ntBASIC3.1□□□□□ -1.91
APOEP02649 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.1□□□□□ -1.91
APOEP02649 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.1□□□□□ -1.91
APOEP02649 AL590399.6-201ENST00000446396 307 ntBASIC3.1□□□□□ -1.91
APOEP02649 SSXP4-201ENST00000451349 245 ntBASIC3.1□□□□□ -1.91
APOEP02649 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.1□□□□□ -1.91
APOEP02649 S100A11P2-201ENST00000467589 312 ntBASIC3.1□□□□□ -1.91
APOEP02649 VN1R17P-201ENST00000472048 1090 ntBASIC3.1□□□□□ -1.91
APOEP02649 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
APOEP02649 HIGD1AP3-201ENST00000515857 278 ntBASIC3.1□□□□□ -1.91
APOEP02649 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOEP02649 SETP2-201ENST00000553886 926 ntBASIC3.1□□□□□ -1.91
APOEP02649 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.1□□□□□ -1.91
APOEP02649 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.1□□□□□ -1.91
APOEP02649 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.1□□□□□ -1.91
APOEP02649 CYCSP41-201ENST00000616920 296 ntBASIC3.1□□□□□ -1.91
APOEP02649 FAM157B-203ENST00000639350 358 ntBASIC3.1□□□□□ -1.91
APOEP02649 AC139713.2-210ENST00000641741 992 ntBASIC3.1□□□□□ -1.91
APOEP02649 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
APOEP02649 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
APOEP02649 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOEP02649 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.09□□□□□ -1.91
APOEP02649 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
APOEP02649 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
APOEP02649 OR5H2-201ENST00000355273 945 ntBASIC3.09□□□□□ -1.91
APOEP02649 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
APOEP02649 SNORA7.2-201ENST00000364446 145 ntBASIC3.09□□□□□ -1.91
APOEP02649 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOEP02649 RPL34P26-201ENST00000445636 354 ntBASIC3.09□□□□□ -1.91
APOEP02649 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.09□□□□□ -1.91
APOEP02649 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.09□□□□□ -1.91
APOEP02649 HMGN1P8-201ENST00000463578 288 ntBASIC3.09□□□□□ -1.91
APOEP02649 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.09□□□□□ -1.91
APOEP02649 AC107398.1-201ENST00000486904 505 ntBASIC3.09□□□□□ -1.91
APOEP02649 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
APOEP02649 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.09□□□□□ -1.91
APOEP02649 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.09□□□□□ -1.91
APOEP02649 OR4V1P-201ENST00000525394 1140 ntBASIC3.09□□□□□ -1.91
APOEP02649 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
APOEP02649 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.09□□□□□ -1.91
APOEP02649 MTND4P31-201ENST00000425607 1343 ntBASIC3.09□□□□□ -1.91
APOEP02649 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
APOEP02649 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.92
APOEP02649 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOEP02649 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOEP02649 EI24P1-201ENST00000416584 867 ntBASIC3.08□□□□□ -1.92
APOEP02649 HSPE1P1-201ENST00000421494 318 ntBASIC3.08□□□□□ -1.92
APOEP02649 AL390023.1-201ENST00000428836 262 ntBASIC3.08□□□□□ -1.92
APOEP02649 Z99714.1-201ENST00000450463 807 ntBASIC3.08□□□□□ -1.92
APOEP02649 snoU13.7-201ENST00000459220 104 ntBASIC3.08□□□□□ -1.92
APOEP02649 RPL7P23-201ENST00000493874 747 ntBASIC3.08□□□□□ -1.92
APOEP02649 AC083906.5-201ENST00000503722 328 ntBASIC3.08□□□□□ -1.92
APOEP02649 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.08□□□□□ -1.92
APOEP02649 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOEP02649 AC147055.1-201ENST00000509261 750 ntBASIC3.08□□□□□ -1.92
APOEP02649 RNU6-56P-201ENST00000516986 93 ntBASIC3.08□□□□□ -1.92
APOEP02649 MTCYBP41-201ENST00000528913 1123 ntBASIC3.08□□□□□ -1.92
APOEP02649 AL160281.1-201ENST00000605307 311 ntBASIC3.08□□□□□ -1.92
APOEP02649 AC093732.2-201ENST00000607950 274 ntBASIC3.08□□□□□ -1.92
APOEP02649 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOEP02649 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOEP02649 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOEP02649 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
APOEP02649 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOEP02649 SNORA9.2-201ENST00000365361 133 ntBASIC3.07□□□□□ -1.92
APOEP02649 RNU1-101P-201ENST00000391171 127 ntBASIC3.07□□□□□ -1.92
APOEP02649 MTATP6P31-201ENST00000406985 692 ntBASIC3.07□□□□□ -1.92
APOEP02649 RPL7P44-201ENST00000424827 742 ntBASIC3.07□□□□□ -1.92
APOEP02649 AL445528.1-201ENST00000426330 420 ntBASIC3.07□□□□□ -1.92
APOEP02649 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.07□□□□□ -1.92
APOEP02649 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.07□□□□□ -1.92
APOEP02649 VDAC1P3-201ENST00000434069 851 ntBASIC3.07□□□□□ -1.92
APOEP02649 RSL24D1P2-201ENST00000445584 366 ntBASIC3.07□□□□□ -1.92
APOEP02649 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
APOEP02649 HMGB1P38-201ENST00000490557 577 ntBASIC3.07□□□□□ -1.92
APOEP02649 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.07□□□□□ -1.92
APOEP02649 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.07□□□□□ -1.92
APOEP02649 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
APOEP02649 ARL4AP2-201ENST00000507378 601 ntBASIC3.07□□□□□ -1.92
APOEP02649 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.07□□□□□ -1.92
APOEP02649 SCGB1D5P-201ENST00000515134 247 ntBASIC3.07□□□□□ -1.92
APOEP02649 AC016550.3-201ENST00000515706 767 ntBASIC3.07□□□□□ -1.92
APOEP02649 OR5G4P-201ENST00000525251 760 ntBASIC3.07□□□□□ -1.92
APOEP02649 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.07□□□□□ -1.92
APOEP02649 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.07□□□□□ -1.92
APOEP02649 AL049870.4-201ENST00000555741 486 ntBASIC3.07□□□□□ -1.92
APOEP02649 AC090616.5-202ENST00000582111 297 ntBASIC3.07□□□□□ -1.92
APOEP02649 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
APOEP02649 AL451007.1-201ENST00000595491 289 ntBASIC3.07□□□□□ -1.92
APOEP02649 AL109653.1-201ENST00000603091 248 ntBASIC3.07□□□□□ -1.92
APOEP02649 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms