Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 GABRG2-229ENST00000641017 3628 ntBASIC2.32□□□□□ -2.04
SPTA1P02549 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.32□□□□□ -2.04
SPTA1P02549 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.32□□□□□ -2.04
SPTA1P02549 RNU6-321P-201ENST00000410912 106 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 AC018634.1-201ENST00000437554 401 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 RPL23AP31-201ENST00000456160 467 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 AC068781.1-201ENST00000488231 618 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 OR4G11P-201ENST00000492842 939 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.31□□□□□ -2.04
SPTA1P02549 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.31□□□□□ -2.04
SPTA1P02549 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.31□□□□□ -2.04
SPTA1P02549 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.31□□□□□ -2.04
SPTA1P02549 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.31□□□□□ -2.04
SPTA1P02549 RMST_9.1-201ENST00000619945 193 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.31□□□□□ -2.04
SPTA1P02549 AC006020.1-201ENST00000420179 1854 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SPTA1P02549 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SPTA1P02549 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.31□□□□□ -2.04
SPTA1P02549 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SPTA1P02549 AC096638.1-201ENST00000444678 216 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 MOB1AP2-201ENST00000446060 614 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SPTA1P02549 NPM1P35-201ENST00000533043 868 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 OR8L1P-201ENST00000534005 955 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.31□□□□□ -2.04
SPTA1P02549 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.31□□□□□ -2.04
SPTA1P02549 AC007423.1-201ENST00000605009 627 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 SNORA35B-201ENST00000607417 129 ntBASIC2.31□□□□□ -2.04
SPTA1P02549 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SPTA1P02549 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SPTA1P02549 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SPTA1P02549 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
SPTA1P02549 FGF7P8-201ENST00000402994 292 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.3□□□□□ -2.04
SPTA1P02549 RN7SL622P-201ENST00000585292 275 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 AC109315.1-201ENST00000584143 1347 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 AL136964.1-201ENST00000622038 2990 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SPTA1P02549 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTA1P02549 RNU1-17P-201ENST00000363022 152 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 YPEL5P1-201ENST00000419731 367 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTA1P02549 AC108667.1-201ENST00000428618 249 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 RPL30P9-201ENST00000465586 330 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SPTA1P02549 RN7SKP43-201ENST00000516173 320 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SPTA1P02549 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTA1P02549 AC026464.5-201ENST00000562497 722 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 AC011494.1-201ENST00000596454 237 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 snoU13.31-201ENST00000607291 104 ntBASIC2.3□□□□□ -2.04
SPTA1P02549 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTA1P02549 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SPTA1P02549 MAPK10-322ENST00000641485 4530 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SPTA1P02549 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SPTA1P02549 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SPTA1P02549 RNA5SP325-201ENST00000363756 130 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 RPS26P30-201ENST00000443431 335 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTA1P02549 HIGD1AP2-201ENST00000446367 280 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC108078.3-201ENST00000502633 489 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.29□□□□□ -2.04
SPTA1P02549 HSPE1P18-201ENST00000517602 280 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.29□□□□□ -2.04
SPTA1P02549 MIR3199-1-201ENST00000582434 88 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTA1P02549 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 MIR6779-201ENST00000617283 64 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC107081.3-201ENST00000612715 2034 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 TTC39DP-201ENST00000416781 1688 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SPTA1P02549 Y_RNA.112-201ENST00000363250 102 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC017078.1-201ENST00000416146 368 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC245291.1-201ENST00000419501 328 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
SPTA1P02549 AC104027.1-201ENST00000521887 300 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC100870.1-201ENST00000522035 505 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC099654.11-201ENST00000638857 294 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 AC087565.3-202ENST00000642085 1603 ntBASIC2.29□□□□□ -2.04
SPTA1P02549 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SPTA1P02549 AL109809.4-201ENST00000603520 2185 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 EI24P2-201ENST00000397776 1076 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 EIF5P1-201ENST00000400019 1231 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 RNA5SP296-201ENST00000410523 111 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTA1P02549 RPL7P10-201ENST00000417407 739 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 RPS12P5-201ENST00000423449 371 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.28□□□□□ -2.04
SPTA1P02549 RPL29P29-201ENST00000448725 423 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 RPL21P134-201ENST00000453468 483 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTA1P02549 RNA5SP490-201ENST00000517141 136 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 AC018630.1-201ENST00000541376 925 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 AC135279.1-201ENST00000543493 504 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 OR4U1P-201ENST00000554958 912 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms