Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MTND5P19-201ENST00000424872 1794 ntBASIC2.61□□□□□ -1.99
TNFP01375 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFP01375 AC110792.3-201ENST00000595906 1614 ntBASIC2.6□□□□□ -1.99
TNFP01375 MTND5P7-201ENST00000413558 1798 ntBASIC2.6□□□□□ -1.99
TNFP01375 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TNFP01375 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.6□□□□□ -1.99
TNFP01375 AL590103.1-201ENST00000434488 307 ntBASIC2.6□□□□□ -1.99
TNFP01375 RPS29P6-201ENST00000438196 145 ntBASIC2.6□□□□□ -1.99
TNFP01375 HIGD1AP11-201ENST00000438361 280 ntBASIC2.6□□□□□ -1.99
TNFP01375 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.6□□□□□ -1.99
TNFP01375 GAPDHP27-201ENST00000447427 1020 ntBASIC2.6□□□□□ -1.99
TNFP01375 VN1R48P-201ENST00000448149 1036 ntBASIC2.6□□□□□ -1.99
TNFP01375 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.6□□□□□ -1.99
TNFP01375 SYF2P1-201ENST00000550658 413 ntBASIC2.6□□□□□ -1.99
TNFP01375 AC009097.3-201ENST00000563557 1018 ntBASIC2.6□□□□□ -1.99
TNFP01375 AC034268.2-201ENST00000571784 482 ntBASIC2.6□□□□□ -1.99
TNFP01375 MIR6817-201ENST00000615588 66 ntBASIC2.6□□□□□ -1.99
TNFP01375 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.6□□□□□ -1.99
TNFP01375 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TNFP01375 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.6□□□□□ -1.99
TNFP01375 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.6□□□□□ -1.99
TNFP01375 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TNFP01375 AC110774.1-201ENST00000623567 2018 ntBASIC2.59□□□□□ -1.99
TNFP01375 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TNFP01375 AL359693.1-201ENST00000614959 2407 ntBASIC2.59□□□□□ -1.99
TNFP01375 FAM35CP-201ENST00000554755 2470 ntBASIC2.59□□□□□ -1.99
TNFP01375 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
TNFP01375 NACA3P-201ENST00000359690 648 ntBASIC2.59□□□□□ -1.99
TNFP01375 RNU4-82P-201ENST00000362443 140 ntBASIC2.59□□□□□ -1.99
TNFP01375 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
TNFP01375 AL139039.1-201ENST00000401900 692 ntBASIC2.59□□□□□ -1.99
TNFP01375 RNA5SP344-201ENST00000411081 104 ntBASIC2.59□□□□□ -1.99
TNFP01375 BMS1P22-201ENST00000414726 313 ntBASIC2.59□□□□□ -1.99
TNFP01375 TRGV6-201ENST00000417928 299 ntBASIC2.59□□□□□ -1.99
TNFP01375 AC093151.1-201ENST00000427711 313 ntBASIC2.59□□□□□ -1.99
TNFP01375 VDAC1P3-201ENST00000434069 851 ntBASIC2.59□□□□□ -1.99
TNFP01375 RPS15AP1-201ENST00000457423 391 ntBASIC2.59□□□□□ -1.99
TNFP01375 RPL21P103-201ENST00000479921 488 ntBASIC2.59□□□□□ -1.99
TNFP01375 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.59□□□□□ -1.99
TNFP01375 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.59□□□□□ -1.99
TNFP01375 OR5H4P-201ENST00000510851 923 ntBASIC2.59□□□□□ -1.99
TNFP01375 RNA5SP148-201ENST00000516527 94 ntBASIC2.59□□□□□ -1.99
TNFP01375 OR8L1P-201ENST00000534005 955 ntBASIC2.59□□□□□ -1.99
TNFP01375 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.59□□□□□ -1.99
TNFP01375 MIR4635-201ENST00000583759 79 ntBASIC2.59□□□□□ -1.99
TNFP01375 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.59□□□□□ -1.99
TNFP01375 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.59□□□□□ -1.99
TNFP01375 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.59□□□□□ -1.99
TNFP01375 AC231759.1-201ENST00000616455 597 ntBASIC2.59□□□□□ -1.99
TNFP01375 AC006065.5-201ENST00000623427 349 ntBASIC2.59□□□□□ -1.99
TNFP01375 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.59□□□□□ -1.99
TNFP01375 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.59□□□□□ -2
TNFP01375 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TNFP01375 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
TNFP01375 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.58□□□□□ -2
TNFP01375 ZNF90P1-201ENST00000480493 1951 ntBASIC2.58□□□□□ -2
TNFP01375 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.58□□□□□ -2
TNFP01375 SAR1AP2-201ENST00000392696 594 ntBASIC2.58□□□□□ -2
TNFP01375 AL445529.1-201ENST00000398713 389 ntBASIC2.58□□□□□ -2
TNFP01375 AL356057.1-202ENST00000402263 756 ntBASIC2.58□□□□□ -2
TNFP01375 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.58□□□□□ -2
TNFP01375 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.58□□□□□ -2
TNFP01375 RPLP0P7-201ENST00000416050 667 ntBASIC2.58□□□□□ -2
TNFP01375 BTF3P9-201ENST00000418784 283 ntBASIC2.58□□□□□ -2
TNFP01375 Z93242.1-201ENST00000427102 353 ntBASIC2.58□□□□□ -2
TNFP01375 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.58□□□□□ -2
TNFP01375 HMGN2P20-201ENST00000437531 273 ntBASIC2.58□□□□□ -2
TNFP01375 CACYBPP1-201ENST00000438592 684 ntBASIC2.58□□□□□ -2
TNFP01375 NPM1P49-201ENST00000448027 714 ntBASIC2.58□□□□□ -2
TNFP01375 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.58□□□□□ -2
TNFP01375 RPL21P18-201ENST00000469899 480 ntBASIC2.58□□□□□ -2
TNFP01375 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.58□□□□□ -2
TNFP01375 AC118282.1-201ENST00000506408 765 ntBASIC2.58□□□□□ -2
TNFP01375 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.58□□□□□ -2
TNFP01375 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TNFP01375 AC119751.1-201ENST00000513357 765 ntBASIC2.58□□□□□ -2
TNFP01375 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.58□□□□□ -2
TNFP01375 RN7SKP282-201ENST00000516824 299 ntBASIC2.58□□□□□ -2
TNFP01375 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.58□□□□□ -2
TNFP01375 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.58□□□□□ -2
TNFP01375 AC234778.2-201ENST00000566241 354 ntBASIC2.58□□□□□ -2
TNFP01375 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.58□□□□□ -2
TNFP01375 MTCO3P24-201ENST00000572729 782 ntBASIC2.58□□□□□ -2
TNFP01375 MIR4435-1-201ENST00000582552 80 ntBASIC2.58□□□□□ -2
TNFP01375 MAGOH2P-202ENST00000584384 429 ntBASIC2.58□□□□□ -2
TNFP01375 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.58□□□□□ -2
TNFP01375 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.58□□□□□ -2
TNFP01375 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.58□□□□□ -2
TNFP01375 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.57□□□□□ -2
TNFP01375 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
TNFP01375 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TNFP01375 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TNFP01375 SNORD62.1-201ENST00000362541 86 ntBASIC2.57□□□□□ -2
TNFP01375 MIR887-201ENST00000401258 79 ntBASIC2.57□□□□□ -2
TNFP01375 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.57□□□□□ -2
TNFP01375 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.57□□□□□ -2
TNFP01375 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.57□□□□□ -2
TNFP01375 SETP8-201ENST00000435341 628 ntBASIC2.57□□□□□ -2
TNFP01375 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.57□□□□□ -2
TNFP01375 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms