Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
GGPS1O95749 AC023158.2-201ENST00000614876 543 ntBASIC4.08□□□□□ -1.76
GGPS1O95749 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.08□□□□□ -1.76
GGPS1O95749 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.08□□□□□ -1.76
GGPS1O95749 PRO1804-201ENST00000623780 2050 ntBASIC4.08□□□□□ -1.76
GGPS1O95749 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.08□□□□□ -1.76
GGPS1O95749 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.08□□□□□ -1.76
GGPS1O95749 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GGPS1O95749 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GGPS1O95749 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.07□□□□□ -1.76
GGPS1O95749 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
GGPS1O95749 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
GGPS1O95749 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.07□□□□□ -1.76
GGPS1O95749 RNU6-657P-201ENST00000383904 107 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 Y_RNA.472-201ENST00000384322 102 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 SNORD116-12-201ENST00000384468 92 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 RNVU1-14-201ENST00000384770 164 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AL121972.1-201ENST00000402023 252 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 HSPE1P8-201ENST00000406997 288 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.07□□□□□ -1.76
GGPS1O95749 EI24P1-201ENST00000416584 867 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 HMGB3P20-201ENST00000417997 600 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 FNDC3CP-201ENST00000420795 1155 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.07□□□□□ -1.76
GGPS1O95749 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.07□□□□□ -1.76
GGPS1O95749 RPL7P44-201ENST00000424827 742 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.07□□□□□ -1.76
GGPS1O95749 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.07□□□□□ -1.76
GGPS1O95749 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.07□□□□□ -1.76
GGPS1O95749 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.07□□□□□ -1.76
GGPS1O95749 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.07□□□□□ -1.76
GGPS1O95749 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.07□□□□□ -1.76
GGPS1O95749 EXOSC3P1-201ENST00000448649 500 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 MTCO3P16-201ENST00000454456 754 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 TVP23BP2-201ENST00000455082 615 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 RPL23AP44-201ENST00000482216 473 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.07□□□□□ -1.76
GGPS1O95749 AC023141.12-201ENST00000512399 199 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 RN7SKP209-201ENST00000516888 304 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 RNU6-1261P-201ENST00000517194 104 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.07□□□□□ -1.76
GGPS1O95749 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.07□□□□□ -1.76
GGPS1O95749 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.07□□□□□ -1.76
GGPS1O95749 AC103843.2-201ENST00000530523 682 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AC023161.2-201ENST00000551218 780 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 TRAV15-201ENST00000556680 249 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AC138915.2-201ENST00000569776 97 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 MIR4509-3-201ENST00000578671 94 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 MIR4509-2-201ENST00000583920 94 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.07□□□□□ -1.76
GGPS1O95749 AC006116.10-201ENST00000591836 581 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.07□□□□□ -1.76
GGPS1O95749 AL390838.2-201ENST00000602394 274 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AL355812.1-201ENST00000603215 216 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AC025946.2-201ENST00000603398 234 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 BRDTP1-201ENST00000605735 677 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.07□□□□□ -1.76
GGPS1O95749 MIR4509-1-201ENST00000618224 94 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AC073968.1-201ENST00000618594 637 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 AL158163.2-201ENST00000619110 700 ntBASIC4.07□□□□□ -1.76
GGPS1O95749 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
GGPS1O95749 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GGPS1O95749 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
GGPS1O95749 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GGPS1O95749 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.07□□□□□ -1.76
GGPS1O95749 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GGPS1O95749 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
GGPS1O95749 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
GGPS1O95749 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 CEP170P1-201ENST00000502249 4587 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.06□□□□□ -1.76
GGPS1O95749 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
GGPS1O95749 RNA5SP50-201ENST00000363731 107 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 RNU6-263P-201ENST00000363811 107 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
GGPS1O95749 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
GGPS1O95749 RNU6-837P-201ENST00000391056 108 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 PTMAP5-201ENST00000393073 333 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 MTND4LP20-201ENST00000402379 270 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 DBIP2-201ENST00000419076 262 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 AL513174.1-201ENST00000423182 629 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 NDUFB1P1-201ENST00000435191 180 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.06□□□□□ -1.76
GGPS1O95749 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.06□□□□□ -1.76
GGPS1O95749 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.06□□□□□ -1.76
GGPS1O95749 WBP1LP4-201ENST00000505043 344 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.06□□□□□ -1.76
GGPS1O95749 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.06□□□□□ -1.76
GGPS1O95749 MTCO1P30-201ENST00000515244 580 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 OR10V3P-201ENST00000525712 725 ntBASIC4.06□□□□□ -1.76
GGPS1O95749 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms