Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC022431.1-201ENST00000450941 438 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 EIF4A1P11-201ENST00000451239 222 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.85□□□□□ -1.63
CDKL5O76039 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.85□□□□□ -1.63
CDKL5O76039 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL5O76039 AC109327.1-201ENST00000471666 403 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 MTND6P6-201ENST00000478031 263 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL5O76039 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.85□□□□□ -1.63
CDKL5O76039 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.85□□□□□ -1.63
CDKL5O76039 AC099522.1-202ENST00000514718 367 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 AP002453.2-201ENST00000533503 320 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL5O76039 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL5O76039 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CDKL5O76039 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CDKL5O76039 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL5O76039 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.85□□□□□ -1.63
CDKL5O76039 AC083760.1-201ENST00000589621 670 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 AC068790.5-201ENST00000602741 355 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 AC010857.1-201ENST00000606398 594 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 AC079228.1-201ENST00000624774 1049 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 OR5AK4P-201ENST00000635912 903 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL5O76039 MTND4P16-201ENST00000466108 1367 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.85□□□□□ -1.63
CDKL5O76039 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL5O76039 AC134882.1-201ENST00000603738 1676 ntBASIC4.85□□□□□ -1.63
CDKL5O76039 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL5O76039 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL5O76039 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL5O76039 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL5O76039 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
CDKL5O76039 ERCC6-202ENST00000374127 1782 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL5O76039 AC073544.1-201ENST00000600110 1595 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.84□□□□□ -1.63
CDKL5O76039 RNU6-492P-201ENST00000363035 104 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 RN7SKP226-201ENST00000364912 300 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 Y_RNA.303-201ENST00000364998 94 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 OR52E6-202ENST00000379946 954 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDKL5O76039 AC104297.1-201ENST00000393779 870 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 MTND4LP20-201ENST00000402379 270 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 RPL23AP26-201ENST00000412728 464 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 RPL17P12-201ENST00000413391 526 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.84□□□□□ -1.63
CDKL5O76039 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL5O76039 MTCO2P19-201ENST00000427513 598 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 COX6B1P7-201ENST00000430845 235 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.84□□□□□ -1.63
CDKL5O76039 KLF3P2-201ENST00000465138 268 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AP000797.1-201ENST00000478870 387 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC041039.1-201ENST00000485656 536 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AF213884.1-201ENST00000488102 463 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC025445.1-201ENST00000502728 300 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL5O76039 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.84□□□□□ -1.63
CDKL5O76039 HMGB1P28-201ENST00000507778 552 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.84□□□□□ -1.63
CDKL5O76039 MTCO1P30-201ENST00000515244 580 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 RNU6-1261P-201ENST00000517194 104 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 IGLVIV-53-201ENST00000520107 367 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC239860.2-201ENST00000525886 270 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 SLC2A13P1-201ENST00000531560 322 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.84□□□□□ -1.63
CDKL5O76039 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL5O76039 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.84□□□□□ -1.63
CDKL5O76039 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.84□□□□□ -1.63
CDKL5O76039 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL5O76039 AC090751.1-201ENST00000566966 267 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL5O76039 AC022655.2-201ENST00000577280 318 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 MIR4284-201ENST00000578924 81 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AP001004.1-201ENST00000582468 324 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL5O76039 IPO5P1-202ENST00000600039 287 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AL596327.1-201ENST00000603629 213 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC114781.5-201ENST00000615297 108 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC004825.2-201ENST00000616634 455 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AL359314.1-201ENST00000616913 261 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC072046.2-201ENST00000618366 268 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AL356321.1-201ENST00000621360 228 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AC011944.2-201ENST00000624440 683 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 AP000843.1-201ENST00000624880 701 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL5O76039 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL5O76039 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL5O76039 Z82217.1-201ENST00000625157 8149 ntBASIC4.84□□□□□ -1.63
CDKL5O76039 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDKL5O76039 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL5O76039 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CDKL5O76039 ELF2P3-201ENST00000445099 1506 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CDKL5O76039 OR5BR1P-201ENST00000524992 1330 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CDKL5O76039 AC016716.1-201ENST00000265882 708 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL5O76039 MIR383-201ENST00000362257 73 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms